Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 SNORA70H-201ENST00000383910 135 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 SNORA70J-201ENST00000384182 135 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 HSPE1P8-201ENST00000406997 288 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 RPL12P17-201ENST00000432393 498 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 CEACAMP1-201ENST00000434624 1035 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 CYCSP43-201ENST00000438233 310 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC004938.1-201ENST00000438468 308 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 RNU7-87P-201ENST00000459343 62 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC006511.1-201ENST00000470614 315 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC097462.2-201ENST00000504623 481 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 RNU6-27P-201ENST00000516146 107 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 RNU6-352P-201ENST00000516908 107 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 AL590705.4-201ENST00000532209 134 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 MIR4659A-201ENST00000580269 81 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC234771.5-201ENST00000600161 514 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 BDH2P1-201ENST00000602288 736 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 AC037487.3-201ENST00000606668 112 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.27□□□□□ -1.41
LRCH3Q96II8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
LRCH3Q96II8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LRCH3Q96II8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 GTF2IP4-201ENST00000453092 2054 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC009951.1-201ENST00000623674 2614 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC083843.3-201ENST00000623679 2186 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC005261.2-201ENST00000593427 4258 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 RPL9P7-201ENST00000330965 580 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 Y_RNA.127-201ENST00000363386 109 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 RNA5SP131-201ENST00000365452 119 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 SNORA51.8-201ENST00000384234 132 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 RNU6-14P-201ENST00000384630 106 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 CYCSP33-201ENST00000414485 327 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AL513043.1-201ENST00000439124 535 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 U8.22-201ENST00000459141 133 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC009120.1-201ENST00000493458 473 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 RNU6-1333P-201ENST00000516162 93 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 IGHV1-14-201ENST00000523391 241 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 MRPS21P7-201ENST00000566937 238 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 RN7SL652P-201ENST00000577769 300 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC123912.5-201ENST00000605470 343 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 AC114947.2-201ENST00000565748 2125 ntBASIC6.26□□□□□ -1.41
LRCH3Q96II8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LRCH3Q96II8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
LRCH3Q96II8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms