Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR8069-2-201ENST00000621412 86 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AL356585.4-201ENST00000623078 1229 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AL158801.5-201ENST00000623123 465 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 OR5AK4P-201ENST00000635912 903 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC068137.3-201ENST00000639191 341 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC073869.6-201ENST00000640656 341 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
TRIM43Q96BQ3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 U8.3-201ENST00000363321 132 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 RNA5SP267-201ENST00000364893 126 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 SNORA48.2-201ENST00000390926 124 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 FCF1P9-201ENST00000412546 282 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 BX295541.1-201ENST00000417774 250 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 ISCA1P6-201ENST00000427740 390 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 MTND4LP10-201ENST00000435146 291 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC009961.2-201ENST00000435771 251 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AL049734.2-201ENST00000441066 616 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC017037.2-201ENST00000513850 890 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 RN7SKP57-201ENST00000517248 293 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC107304.1-201ENST00000604229 296 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AL022154.1-201ENST00000604698 785 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC091304.9-201ENST00000612091 226 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC138649.3-201ENST00000622154 254 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AC095031.1-201ENST00000623685 672 ntBASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM43Q96BQ3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC244517.1-201ENST00000606030 2086 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC011266.1-201ENST00000624119 3569 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 UBE2V1P10-201ENST00000414685 269 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC233728.2-201ENST00000425348 757 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL589872.1-201ENST00000426602 288 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MTND1P4-201ENST00000435196 415 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC115115.1-201ENST00000449927 248 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC108022.1-201ENST00000493466 478 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC012170.1-201ENST00000495139 359 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL117351.2-201ENST00000513571 157 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 RNU1-103P-201ENST00000516502 125 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 RNU6-528P-201ENST00000516926 100 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC090151.1-201ENST00000520784 730 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 PHBP17-201ENST00000528576 541 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 DEFB108A-201ENST00000530110 222 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL391840.1-201ENST00000571144 367 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 VN1R79P-201ENST00000593540 513 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 AL355472.4-201ENST00000610233 626 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms