Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 HSPE1P8-201ENST00000406997 288 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 HMGN1P24-201ENST00000412282 298 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC002075.2-201ENST00000425207 252 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL591419.1-201ENST00000427423 339 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC092573.2-201ENST00000434546 243 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC083863.1-201ENST00000438811 231 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 HMGB1P37-201ENST00000439613 609 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL831737.1-201ENST00000441288 271 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 FAM103A2P-201ENST00000444122 354 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC009237.8-201ENST00000445492 379 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 MTCYBP3-201ENST00000445588 1137 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 OR6K1P-201ENST00000456766 971 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC006499.5-201ENST00000505037 514 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 RNU1-95P-201ENST00000516357 160 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 RNU1-128P-201ENST00000516704 160 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 RNU6-678P-201ENST00000516832 109 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC026403.1-201ENST00000518938 295 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC013828.2-201ENST00000532487 235 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL133271.1-201ENST00000538229 291 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 MIR544B-201ENST00000582372 78 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL031985.2-201ENST00000600955 480 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC068313.1-201ENST00000604028 1008 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC106791.2-201ENST00000604680 391 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 BRDTP1-201ENST00000605735 677 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC079395.3-201ENST00000615161 484 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AL031667.3-201ENST00000620124 655 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SKA1Q96BD8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SKA1Q96BD8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SKA1Q96BD8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 FAM35BP-202ENST00000497389 3337 ntBASIC3.88□□□□□ -1.79
SKA1Q96BD8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.88□□□□□ -1.79
SKA1Q96BD8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SKA1Q96BD8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 ZNF285B-201ENST00000561698 1767 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 SNORA63.1-201ENST00000362493 131 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 SNORA23-201ENST00000365128 182 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 SNORA70.4-201ENST00000365509 134 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL354719.1-201ENST00000406535 843 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 MTND1P20-201ENST00000430341 950 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL606662.1-201ENST00000445763 553 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 HMGB3P8-201ENST00000449709 577 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 RPL23AP14-201ENST00000468281 468 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC00888-204ENST00000487386 421 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC021678.1-201ENST00000505195 936 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 NDUFA5P2-201ENST00000519723 344 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 MTATP6P15-201ENST00000527233 835 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC124947.2-202ENST00000552735 133 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC090877.1-201ENST00000561418 344 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC112187.2-201ENST00000604345 283 ntBASIC3.87□□□□□ -1.79
SKA1Q96BD8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
SKA1Q96BD8 AC093838.1-201ENST00000613014 469 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms