Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL031679.1-201ENST00000400616 525 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 RAP1BP3-201ENST00000407180 549 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 TAF13P2-201ENST00000416876 286 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 RPS24P1-201ENST00000438550 371 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 MTATP6P23-201ENST00000440153 476 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 MTCYBP3-201ENST00000445588 1137 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC110792.2-201ENST00000510278 224 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 LTV1P1-201ENST00000510683 1237 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 snoZ278.1-201ENST00000517059 112 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 MTND4LP26-201ENST00000518144 282 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC103783.1-201ENST00000520506 373 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC092851.1-201ENST00000535964 478 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC025260.1-201ENST00000548858 430 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AL157394.1-201ENST00000562983 1224 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 EIF5A2P1-201ENST00000564027 460 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC090751.1-201ENST00000566966 267 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC008507.1-201ENST00000587506 734 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 LLPHP1-201ENST00000603571 367 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC018618.2-201ENST00000604770 446 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AL365503.1-201ENST00000605247 905 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AL359535.1-201ENST00000612100 1087 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC087241.4-201ENST00000612441 480 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC025588.4-201ENST00000615802 908 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 U6atac.1-201ENST00000616025 117 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 VN1R7P-201ENST00000619242 903 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC109454.4-201ENST00000623411 649 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC068137.3-201ENST00000639191 341 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 AC073869.6-201ENST00000640656 341 ntBASIC3.67□□□□□ -1.82
SNED1Q8TER0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNED1Q8TER0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 MT-TH-201ENST00000387441 69 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 RNU6-757P-201ENST00000410334 100 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL663109.1-201ENST00000411498 844 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC010385.1-201ENST00000412374 256 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 PRELID3BP11-201ENST00000414230 479 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC127526.1-201ENST00000417526 366 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC019097.1-201ENST00000424783 735 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 Z93242.1-201ENST00000427102 353 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 FTH1P6-201ENST00000430768 320 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 RPL7P29-201ENST00000437151 728 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 MTND3P1-201ENST00000441336 220 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 MTCO1P19-201ENST00000443487 500 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL606662.1-201ENST00000445763 553 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC108078.3-201ENST00000502633 489 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC034159.1-201ENST00000513885 583 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC008562.1-201ENST00000521763 330 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 COX6CP8-201ENST00000522620 226 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 OR5G4P-201ENST00000525251 760 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 HIGD1AP17-201ENST00000554576 276 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC091544.4-201ENST00000555268 342 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC079089.3-201ENST00000603094 673 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 RNA5SP108-201ENST00000605921 117 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 AL139418.1-201ENST00000613613 177 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 MIR6864-201ENST00000617935 70 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC009878.1-201ENST00000621819 340 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 AC073476.4-201ENST00000628409 72 ntBASIC3.66□□□□□ -1.82
SNED1Q8TER0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.66□□□□□ -1.82
SNED1Q8TER0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNED1Q8TER0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SNED1Q8TER0 Y_RNA.192-201ENST00000363977 102 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 RNU6-867P-201ENST00000364956 107 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 RNU6-920P-201ENST00000410926 92 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.65□□□□□ -1.83
SNED1Q8TER0 NPM1P11-201ENST00000417106 855 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL139413.1-201ENST00000421309 217 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 MTCO2P34-201ENST00000421994 607 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AC092832.1-201ENST00000422934 400 ntBASIC3.65□□□□□ -1.83
SNED1Q8TER0 AL049610.1-201ENST00000423374 372 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms