Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BNIP3P23-201ENST00000599655 511 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 U73023.1-201ENST00000603134 700 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC004987.4-201ENST00000603383 338 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 RPL23AP92-201ENST00000603609 255 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC092354.1-201ENST00000606057 376 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC097468.3-201ENST00000607956 456 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC006329.2-201ENST00000611491 394 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AL445264.1-201ENST00000621719 171 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 Z69908.1-201ENST00000622603 247 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 AC127502.3-201ENST00000636170 1206 ntBASIC2.67□□□□□ -1.98
LINC01006Q8NI28 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LINC01006Q8NI28 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL356274.2-201ENST00000624379 3752 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 Y_RNA.97-201ENST00000363094 102 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 Y_RNA.548-201ENST00000384656 105 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 MTCYBP36-201ENST00000404146 440 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RNU2-15P-201ENST00000410692 191 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RNU4-78P-201ENST00000410940 126 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC109780.2-201ENST00000413467 845 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 EI24P1-201ENST00000416584 867 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 SEPT2P1-201ENST00000419651 180 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 MED14P1-201ENST00000430517 648 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 THAP5P1-201ENST00000439089 262 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 MTND1P30-201ENST00000441241 901 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL831737.1-201ENST00000441288 271 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 TRIM60P18-201ENST00000441518 828 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 HSPE1P28-201ENST00000443139 211 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RPS20P32-201ENST00000456044 356 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RPL31P3-201ENST00000458430 332 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AP001992.1-205ENST00000462248 379 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC084357.1-201ENST00000473404 255 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC078918.1-201ENST00000498515 228 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC021678.1-201ENST00000505195 936 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 APOOP4-201ENST00000513530 597 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 RNA5SP216-201ENST00000516111 123 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 HIGD1AP10-201ENST00000527837 282 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 ACTR3BP3-201ENST00000565577 979 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC012414.6-201ENST00000568241 401 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC008507.1-201ENST00000587506 734 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC040904.1-201ENST00000590850 223 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AL139286.1-201ENST00000604465 483 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC090186.1-201ENST00000605991 572 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC064807.4-201ENST00000607201 407 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC080013.4-201ENST00000607624 649 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 AC006927.3-201ENST00000638789 384 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.66□□□□□ -1.98
LINC01006Q8NI28 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LINC01006Q8NI28 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms