Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
CLHC1Q8NHS4 MTND4P21-201ENST00000453886 1357 ntBASIC2.59□□□□□ -2
CLHC1Q8NHS4 SGO1P1-201ENST00000603525 1447 ntBASIC2.59□□□□□ -2
CLHC1Q8NHS4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
CLHC1Q8NHS4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 MIR16-1-201ENST00000385271 89 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 MIR767-201ENST00000390228 109 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 ANAPC10P1-201ENST00000395991 556 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 UBE2V1P15-201ENST00000407776 448 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 Z92545.1-201ENST00000411782 234 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AL365496.1-201ENST00000426885 215 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 CYCSP32-201ENST00000440548 321 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AC002542.1-201ENST00000440683 193 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AC104164.3-201ENST00000467363 1258 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 AP000916.1-201ENST00000533869 835 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 AL355836.1-201ENST00000555951 870 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AC090888.1-201ENST00000561335 1141 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 SNORD39.3-201ENST00000584451 71 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
CLHC1Q8NHS4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.58□□□□□ -2
CLHC1Q8NHS4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLHC1Q8NHS4 TAB3P1-202ENST00000452645 1634 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC092638.1-201ENST00000411966 1275 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL158050.1-201ENST00000416077 457 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 CACYBPP2-201ENST00000453625 678 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 MTCO3P2-201ENST00000457365 171 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 RPL30P5-201ENST00000494923 336 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC117522.3-201ENST00000507974 584 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL359273.1-201ENST00000510918 627 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC113155.1-201ENST00000511141 769 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 RNA5SP367-201ENST00000516557 118 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC100870.1-201ENST00000522035 505 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC026616.1-201ENST00000523157 525 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC007954.1-201ENST00000554198 494 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 ACTR3BP3-201ENST00000565577 979 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 HMGB1P6-201ENST00000569046 646 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC008277.2-201ENST00000605196 797 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC097504.2-201ENST00000608088 454 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AC245100.7-201ENST00000609678 442 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 VN1R9P-201ENST00000614184 867 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.57□□□□□ -2
CLHC1Q8NHS4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
CLHC1Q8NHS4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLHC1Q8NHS4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 RNU6-1155P-201ENST00000363554 107 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 RNU1-140P-201ENST00000365040 165 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLHC1Q8NHS4 SNORA44-201ENST00000384584 132 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 AL355615.1-201ENST00000406187 641 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 RPS4XP7-201ENST00000406274 780 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.56□□□□□ -2
CLHC1Q8NHS4 RPL31P54-201ENST00000429803 370 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 AL135938.1-201ENST00000443141 297 ntBASIC2.56□□□□□ -2
CLHC1Q8NHS4 GTF2IP12-201ENST00000456547 356 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms