Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 RPL23AP33-201ENST00000442301 452 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 SSXP1-201ENST00000453640 473 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 SNRPFP4-201ENST00000456366 242 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC078918.1-201ENST00000498515 228 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC010625.1-201ENST00000511296 403 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AGGF1P4-201ENST00000568249 801 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MIR5697-201ENST00000578045 78 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MIR3611-201ENST00000584484 83 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 MIR548AB-201ENST00000584917 84 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 AC027807.2-201ENST00000616099 408 ntBASIC4.07□□□□□ -1.76
VPS52Q8N1B4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS52Q8N1B4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RNU5F-7P-201ENST00000363696 115 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RNA5SP72-201ENST00000364442 117 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RNU4-75P-201ENST00000364621 146 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RNA5SP51-201ENST00000364750 119 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RNU6-328P-201ENST00000390887 106 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RPL21P32-201ENST00000419877 477 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 MTCYBP45-201ENST00000435243 565 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 BTF3P5-201ENST00000457252 467 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 RPS20P24-201ENST00000457473 361 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 UBDP1-202ENST00000457888 382 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 snoU13.24-201ENST00000458998 104 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC078785.3-201ENST00000476607 425 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 ARL2BPP4-201ENST00000506854 471 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AC006065.5-201ENST00000623427 349 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AL603839.4-201ENST00000624658 1005 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS52Q8N1B4 AL049780.3-201ENST00000624612 1583 ntBASIC4.06□□□□□ -1.76
VPS52Q8N1B4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MIR423-201ENST00000362201 94 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 RNY4P24-201ENST00000362735 96 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 OR5H15-201ENST00000383696 930 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 SNORD51-201ENST00000384320 80 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 RNU6-1119P-201ENST00000384349 108 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MIR491-201ENST00000384877 84 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MIR483-201ENST00000385070 76 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MT-TC-201ENST00000387405 66 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 DEFB108C-201ENST00000400154 252 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 RNU2-15P-201ENST00000410692 191 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AL663109.1-201ENST00000411498 844 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC007899.1-201ENST00000412776 775 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC006548.1-201ENST00000427470 102 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC091862.1-201ENST00000438016 1100 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC092473.1-201ENST00000441098 221 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms