Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AP000867.2-201ENST00000532468 320 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC008277.2-201ENST00000605196 797 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC004825.2-201ENST00000616634 455 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AL139811.1-201ENST00000424779 2299 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 SNORA31-201ENST00000362607 130 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 RNU6-582P-201ENST00000362989 107 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 MCTS2P-201ENST00000394552 546 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AL121972.1-201ENST00000402023 252 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 RNU4-26P-201ENST00000410270 107 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 RNU2-47P-201ENST00000410649 186 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 RNU2-71P-201ENST00000411395 189 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 RPS3AP37-201ENST00000419176 745 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 NDUFA5P7-201ENST00000452914 242 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC004062.1-201ENST00000509926 645 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 MTCO2P32-201ENST00000514865 403 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 MTND2P32-201ENST00000521584 1038 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AL133271.1-201ENST00000538229 291 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC093519.1-201ENST00000566109 298 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC021749.1-201ENST00000604322 607 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC113194.1-201ENST00000606037 500 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC092608.2-201ENST00000624427 218 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 U6.101-201ENST00000637707 76 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 AC131280.1-202ENST00000624067 4211 ntBASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL27A1Q8IZC6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 RNA5SP167-201ENST00000365461 116 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AL136310.1-201ENST00000404926 654 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 Z98742.3-201ENST00000418637 326 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 BX276092.3-201ENST00000424182 230 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 CKS1BP5-201ENST00000434172 273 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AL590103.1-201ENST00000434488 307 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 RPL23AP74-201ENST00000437246 471 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 MTCYBP31-201ENST00000438855 1122 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC092393.1-201ENST00000439625 742 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 NPM1P49-201ENST00000448027 714 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC079776.3-201ENST00000450665 370 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 PTGES3P5-201ENST00000455109 434 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 PNPLA4P1-201ENST00000458328 305 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 SYPL1P1-201ENST00000473622 768 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 UBL5P3-201ENST00000475112 231 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC113420.1-201ENST00000507903 571 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AP004242.1-201ENST00000533701 349 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC090502.2-201ENST00000549267 280 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 MTCYBP23-201ENST00000558717 1102 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 BDH2P1-201ENST00000602288 736 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 YWHAQP7-201ENST00000603536 658 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC069545.1-201ENST00000605671 358 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC024060.1-201ENST00000607052 494 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC034229.4-201ENST00000607861 441 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AP005137.2-201ENST00000609238 400 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC023510.2-201ENST00000622162 746 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 AC104985.3-201ENST00000623479 597 ntBASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL27A1Q8IZC6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC117529.2-201ENST00000512159 2068 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 XIAPP3-201ENST00000312918 795 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 SNRPEP3-201ENST00000338402 276 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RNU6-173P-201ENST00000364215 104 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 Y_RNA.472-201ENST00000384322 102 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 RPS15AP6-201ENST00000420703 385 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC007435.1-201ENST00000421086 415 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 AC114973.1-201ENST00000429057 632 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 MTCO1P3-201ENST00000429327 192 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 FAM103A2P-201ENST00000444122 354 ntBASIC2.37□□□□□ -2.03
COL27A1Q8IZC6 EXOSC3P1-201ENST00000448649 500 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms