Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 OR4H12P-201ENST00000556269 907 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AL354943.1-201ENST00000572103 781 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC093424.1-201ENST00000604999 338 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC112220.3-201ENST00000605502 502 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC079395.3-201ENST00000615161 484 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 AL022578.1-201ENST00000439330 1433 ntBASIC2.91□□□□□ -1.94
C9orf40Q8IXQ3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.9□□□□□ -1.94
C9orf40Q8IXQ3 AC138915.3-201ENST00000562908 1389 ntBASIC2.9□□□□□ -1.94
C9orf40Q8IXQ3 MTND4P34-201ENST00000572715 1371 ntBASIC2.9□□□□□ -1.94
C9orf40Q8IXQ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 U3.11-201ENST00000364476 212 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 MIR491-201ENST00000384877 84 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-952P-201ENST00000391164 108 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 MTCO2P21-201ENST00000419780 677 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 RPL7P30-201ENST00000420888 709 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 RPL23AP69-201ENST00000431134 458 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 EZH2P1-201ENST00000431167 291 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 MUPP-201ENST00000438111 566 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC108734.1-201ENST00000439549 399 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 ST13P14-201ENST00000474095 734 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 RPS3AP43-201ENST00000479743 781 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC105185.1-201ENST00000518705 535 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 MTATP6P24-201ENST00000576835 677 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AC063944.3-201ENST00000609969 533 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AL590282.1-201ENST00000610379 1136 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 AF127577.6-201ENST00000623352 2191 ntBASIC2.9□□□□□ -1.95
C9orf40Q8IXQ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-28P-201ENST00000362378 107 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 SNORD113-6-201ENST00000363345 75 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 SNORA4.1-201ENST00000364263 144 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 RNU2-37P-201ENST00000410695 177 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC099677.1-201ENST00000420575 175 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 VDAC1P3-201ENST00000434069 851 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 MTCYBP45-201ENST00000435243 565 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 USP9YP10-201ENST00000454868 628 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 BX322784.1-201ENST00000455793 1077 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 MEMO1P3-201ENST00000459811 302 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC017015.1-201ENST00000477387 286 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC026427.2-201ENST00000506228 536 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC004062.1-201ENST00000509926 645 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 SETP7-201ENST00000552169 453 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 MIR3200-201ENST00000580767 85 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AL031281.1-201ENST00000604049 488 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AL390208.1-201ENST00000605885 644 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AL139418.1-201ENST00000613613 177 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC099506.2-201ENST00000623074 221 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 AC079228.1-201ENST00000624774 1049 ntBASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms