Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC112230.1-201ENST00000604342 547 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 AC112187.2-201ENST00000604345 283 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 RNU1-30P-201ENST00000606575 163 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 AC080013.4-201ENST00000607624 649 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 AC091965.4-201ENST00000607691 587 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 AC006566.1-201ENST00000608943 513 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 AC112484.5-201ENST00000624189 228 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 CCT4P2-201ENST00000233836 1548 ntBASIC3.12□□□□□ -1.91
LRRTM1Q86UE6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RNU6-28P-201ENST00000362378 107 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RNU6-533P-201ENST00000384144 107 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 SNORA40.3-201ENST00000390964 122 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL022722.2-201ENST00000402519 180 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 Y_RNA.625-201ENST00000411256 107 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MTCO1P17-201ENST00000411522 491 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 HMGN1P14-201ENST00000412459 517 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC007899.1-201ENST00000412776 775 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 C4BPAP2-201ENST00000428434 478 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC092641.1-201ENST00000440229 772 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC010655.1-201ENST00000449336 292 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 USP9YP12-201ENST00000450481 570 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC009220.1-201ENST00000451614 275 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RPS20P32-201ENST00000456044 356 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 CEACAMP4-201ENST00000457676 421 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AP000873.1-201ENST00000463987 400 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC021205.2-201ENST00000480069 347 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 FAM172BP-201ENST00000487497 1089 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 PHBP14-201ENST00000512887 367 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RNU6-27P-201ENST00000516146 107 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RNU2-27P-201ENST00000516185 142 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RNU6-405P-201ENST00000516637 110 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MTND4LP18-201ENST00000526864 291 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MIR3913-1-201ENST00000577744 102 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC005771.1-201ENST00000585581 349 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC079089.3-201ENST00000603094 673 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL049634.3-201ENST00000604968 457 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC013476.2-201ENST00000614456 459 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 U73479.1-201ENST00000618062 168 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 FP236240.3-201ENST00000623061 327 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL392088.2-201ENST00000637607 285 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC099654.13-201ENST00000639774 207 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 MTND5P29-201ENST00000458676 1807 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AL049780.3-201ENST00000624612 1583 ntBASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM1Q86UE6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RPL32P3-201ENST00000359025 275 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RNU6-853P-201ENST00000364306 107 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 MIR141-201ENST00000384975 95 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RPS20P2-201ENST00000402520 389 ntBASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRTM1Q86UE6 RNA5SP56-201ENST00000410277 118 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms