Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AL031119.1-201ENST00000404707 1879 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC144833.1-201ENST00000567953 4089 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.81-201ENST00000362997 102 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.170-201ENST00000363746 110 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-682P-201ENST00000363843 106 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RNA5SP187-201ENST00000384400 119 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SNORD73A-201ENST00000386062 65 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 OR3A2-201ENST00000408891 1076 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RNF10P1-201ENST00000418589 369 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AL031736.2-201ENST00000426573 787 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 HMGN2P27-201ENST00000427352 270 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SETP5-201ENST00000437270 562 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC008481.1-201ENST00000463278 396 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 ACA59.1-201ENST00000515966 143 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-1278P-201ENST00000516130 107 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC027308.1-201ENST00000517993 110 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC009962.1-201ENST00000567327 3813 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 MIR4443-201ENST00000585052 53 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AL589674.2-201ENST00000604304 337 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-85P-201ENST00000605989 107 ntBASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.6□□□□□ -1.51
LYSMD3Q7Z3D4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.199-201ENST00000364014 102 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RPS23P10-201ENST00000416185 486 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC092423.1-201ENST00000430165 186 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RPL23AP22-201ENST00000437556 453 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC008264.1-201ENST00000447612 367 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AL596266.1-201ENST00000448132 400 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AL450023.1-201ENST00000450868 751 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC010631.1-201ENST00000474150 156 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RN7SL466P-201ENST00000497546 295 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RPS17P5-201ENST00000498293 408 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC074198.2-201ENST00000508153 258 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC008716.1-201ENST00000511084 513 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-27P-201ENST00000516146 107 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-1338P-201ENST00000516328 91 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.713-201ENST00000517013 96 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AMZ2P1-203ENST00000565833 850 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC174048.1-201ENST00000603389 144 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AL512624.1-201ENST00000613638 469 ntBASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LYSMD3Q7Z3D4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LYSMD3Q7Z3D4 OR4F13P-202ENST00000560066 2054 ntBASIC5.59□□□□□ -1.52
LYSMD3Q7Z3D4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 MIR411-201ENST00000362239 96 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 SNORA69.1-201ENST00000390904 137 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 RNU11-4P-201ENST00000391149 133 ntBASIC5.58□□□□□ -1.52
LYSMD3Q7Z3D4 AL009179.1-201ENST00000406085 265 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms