Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RPL23AP14-201ENST00000468281 468 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC034236.1-201ENST00000469891 373 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC068587.2-201ENST00000478386 781 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 RNU6-232P-201ENST00000517144 64 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC023161.2-201ENST00000551218 780 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC034268.2-201ENST00000571784 482 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AP002826.1-201ENST00000608835 315 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL603755.1-201ENST00000619504 163 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AC120349.3-201ENST00000624377 529 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL159972.1-201ENST00000625150 448 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 OR6C71P-202ENST00000641886 1107 ntBASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX30Q5VWJ9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC011460.1-201ENST00000636268 1834 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 RNU6-500P-201ENST00000362349 107 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 MIR7-3-201ENST00000384898 110 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 BX119904.4-201ENST00000424402 301 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 HMGN2P31-201ENST00000432430 273 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 THAP5P1-201ENST00000439089 262 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC092641.1-201ENST00000440229 772 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 RPL21P23-201ENST00000446654 460 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 RBMY2UP-201ENST00000453474 324 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 ART2BP-201ENST00000453501 499 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AP1S2P1-201ENST00000457344 379 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 BZW1P2-201ENST00000473537 826 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 RPF2P2-201ENST00000504693 896 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 RN7SKP13-201ENST00000515933 244 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 DUXAP2-201ENST00000519198 589 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 MED28P6-201ENST00000558776 231 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 PCMTD1P2-201ENST00000565017 355 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 MIR544B-201ENST00000582372 78 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC010591.1-201ENST00000603941 649 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AL732618.1-201ENST00000623251 301 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC006927.3-201ENST00000638789 384 ntBASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX30Q5VWJ9 AC009812.4-201ENST00000569134 1805 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 CEP170P1-201ENST00000502249 4587 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC009902.3-201ENST00000606235 2172 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 DEFB108F-201ENST00000344638 222 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RNU6-114P-201ENST00000384704 105 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AP000567.1-201ENST00000406413 156 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RPS3AP24-201ENST00000407896 734 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 MIR1290-201ENST00000408735 78 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RNU4-72P-201ENST00000410754 173 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RPS29P4-201ENST00000414733 161 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC093578.1-201ENST00000415219 368 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC024082.2-201ENST00000434771 238 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 UBE2D3P1-201ENST00000436669 444 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 RPL35AP22-201ENST00000436855 335 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC091862.1-201ENST00000438016 1100 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AL133217.1-201ENST00000450980 425 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC108860.1-201ENST00000484521 383 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 AP001804.3-201ENST00000525146 880 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 DEFB108D-201ENST00000527787 222 ntBASIC3.79□□□□□ -1.8
SNX30Q5VWJ9 OR5B10P-201ENST00000532869 642 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms