Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL358913.1-201ENST00000554342 121 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 RPL7P50-201ENST00000600588 727 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AL360012.1-201ENST00000602813 131 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 NANOGP3-201ENST00000605855 286 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AC107294.1-201ENST00000609524 467 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 U1.25-201ENST00000614085 162 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AL138726.1-201ENST00000614873 333 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AC123768.4-201ENST00000616244 701 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AP005019.3-201ENST00000620418 560 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 PNPT1P2-201ENST00000456768 2050 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 AL121839.2-201ENST00000565058 6943 ntBASIC5.58□□□□□ -1.52
COL13A1Q5TAT6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SAGE4P-201ENST00000442271 3381 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RNA5SP391-201ENST00000363456 119 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RNA5SP513-201ENST00000364648 118 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 Y_RNA.463-201ENST00000384271 102 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SNORA24.1-201ENST00000384401 135 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 Y_RNA.574-201ENST00000384766 95 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RNU2-36P-201ENST00000410361 191 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RAC1P6-201ENST00000423911 575 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RPL35AP22-201ENST00000436855 335 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AL500522.2-201ENST00000448562 343 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AL162388.1-201ENST00000450912 352 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RPL12P25-201ENST00000455592 494 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 snoU13.7-201ENST00000459220 104 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RPL5P30-201ENST00000465511 891 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RPL21P126-201ENST00000470049 478 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 HMGB1P30-201ENST00000492455 606 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 snoU109.6-201ENST00000516831 118 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RNU6-798P-201ENST00000516912 103 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AP000859.1-201ENST00000525536 307 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC092470.1-201ENST00000546187 132 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 NF1P5-201ENST00000588287 448 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC008814.1-201ENST00000603797 406 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 NUTF2P8-201ENST00000604593 363 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC012443.1-201ENST00000605605 231 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 PISRT1.1-201ENST00000616930 107 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 AC112484.5-201ENST00000624189 228 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 API5P2-201ENST00000397055 1498 ntBASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL13A1Q5TAT6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 RNA5SP366-201ENST00000365454 123 ntBASIC5.56□□□□□ -1.52
COL13A1Q5TAT6 DEFB109C-201ENST00000382575 264 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms