Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX1Q15475 POU5F1P7-201ENST00000508759 541 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX1Q15475 MTCO3P44-201ENST00000510977 541 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SIX1Q15475 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX1Q15475 RNU6-232P-201ENST00000517144 64 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 IGKV2D-36-201ENST00000518643 226 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 HSPA8P13-201ENST00000523715 472 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC011611.1-201ENST00000552179 197 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIX1Q15475 AC090888.1-201ENST00000561335 1141 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC008088.1-201ENST00000580993 280 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 MAGOH2P-202ENST00000584384 429 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX1Q15475 LLPHP1-201ENST00000603571 367 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AL596327.1-201ENST00000603629 213 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC124312.4-201ENST00000605533 310 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC004223.4-201ENST00000612426 332 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC138932.5-201ENST00000617759 563 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 CU459211.1-201ENST00000635667 749 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC007671.2-201ENST00000637344 619 ntBASIC3.18□□□□□ -1.9
SIX1Q15475 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX1Q15475 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SIX1Q15475 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 OR1S2-201ENST00000302592 978 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 SNORD82-201ENST00000365530 70 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 MIR483-201ENST00000385070 76 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 DHFRP6-201ENST00000401776 268 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIX1Q15475 AC005517.2-201ENST00000424673 553 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 RPS29P6-201ENST00000438196 145 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AL445567.1-201ENST00000439121 144 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX1Q15475 RPL23AP33-201ENST00000442301 452 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.17□□□□□ -1.9
SIX1Q15475 AL590399.6-201ENST00000446396 307 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC118465.1-201ENST00000513820 1271 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX1Q15475 OR7K1P-201ENST00000546439 926 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX1Q15475 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 NCAPGP2-201ENST00000557911 754 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC109446.2-201ENST00000567872 497 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC135628.1-201ENST00000568867 534 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 RPL23AP92-201ENST00000603609 255 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC024560.3-201ENST00000608482 349 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 AC025588.4-201ENST00000615802 908 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 AC079228.1-201ENST00000624774 1049 ntBASIC3.17□□□□□ -1.9
SIX1Q15475 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIX1Q15475 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SIX1Q15475 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIX1Q15475 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SIX1Q15475 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX1Q15475 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SIX1Q15475 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SIX1Q15475 RNU6-356P-201ENST00000384140 107 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 RNU6-339P-201ENST00000384310 107 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 RNU6-253P-201ENST00000384730 105 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL121972.1-201ENST00000402023 252 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 MIR1250-201ENST00000408098 113 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 NDUFB4P5-201ENST00000415445 361 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX1Q15475 AL158156.1-201ENST00000422509 473 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 ZYG11AP1-201ENST00000430329 837 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC244505.4-201ENST00000434905 287 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 AC127537.2-201ENST00000439258 465 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 SSXP5-201ENST00000443473 287 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC016696.1-201ENST00000446949 318 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.16□□□□□ -1.9
SIX1Q15475 ARPC3P5-201ENST00000448802 534 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX1Q15475 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.16□□□□□ -1.9
SIX1Q15475 RPL9P32-201ENST00000464118 620 ntBASIC3.16□□□□□ -1.9
SIX1Q15475 RN7SL601P-201ENST00000471221 293 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms