Protein–RNA interactions for Protein: Q15116

PDCD1, Programmed cell death protein 1, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1Q15116 RN7SKP256-201ENST00000517201 314 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 SNRPGP16-201ENST00000533275 226 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 MIR3934-201ENST00000579806 107 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 MIR4436B2-201ENST00000581415 91 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 MIR4436B1-201ENST00000583272 91 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AC011487.3-201ENST00000593607 453 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 uc_338.5-201ENST00000611839 155 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 AL355810.1-201ENST00000614629 552 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 MTND5P42-201ENST00000637720 498 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDCD1Q15116 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.23□□□□□ -1.73
PDCD1Q15116 MTND4P35-201ENST00000604257 1375 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PDCD1Q15116 AL672167.1-203ENST00000641299 2975 ntBASIC4.23□□□□□ -1.73
PDCD1Q15116 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC009643.2-201ENST00000603543 1448 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDCD1Q15116 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDCD1Q15116 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 SNURFL-201ENST00000309296 343 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 SNORD81.2-201ENST00000365153 76 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 Y_RNA.356-201ENST00000365475 113 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 SNORA32.2-201ENST00000384049 122 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AL513331.1-201ENST00000411908 397 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 MTND3P8-201ENST00000412909 339 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.22□□□□□ -1.73
PDCD1Q15116 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 RPL27AP8-201ENST00000424277 446 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AL591704.1-201ENST00000432574 275 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.22□□□□□ -1.73
PDCD1Q15116 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC116533.1-201ENST00000459748 321 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 RPS29P22-201ENST00000472363 168 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 S100A11P1-201ENST00000477525 312 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 RN7SL244P-201ENST00000493405 297 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 Y_RNA.654-201ENST00000497848 106 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AC078918.1-201ENST00000498515 228 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 AL359273.1-201ENST00000510918 627 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 RNA5SP249-201ENST00000516127 99 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 RNU6-123P-201ENST00000516163 102 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 RNU6-927P-201ENST00000516199 100 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 BTF3P12-201ENST00000519620 469 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.22□□□□□ -1.73
PDCD1Q15116 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC005668.1-201ENST00000571142 476 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 MIR3936-201ENST00000584304 110 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.22□□□□□ -1.73
PDCD1Q15116 AL670379.4-201ENST00000605279 254 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AL022345.1-201ENST00000607292 135 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.22□□□□□ -1.73
PDCD1Q15116 A2MP1-204ENST00000566278 4130 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDCD1Q15116 AC121333.1-201ENST00000567488 2709 ntBASIC4.22□□□□□ -1.73
PDCD1Q15116 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.21□□□□□ -1.73
PDCD1Q15116 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDCD1Q15116 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDCD1Q15116 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PDCD1Q15116 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDCD1Q15116 AC139713.2-214ENST00000642059 1811 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDCD1Q15116 AC010300.1-201ENST00000600671 5134 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.21□□□□□ -1.74
PDCD1Q15116 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PDCD1Q15116 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDCD1Q15116 SALL4P2-201ENST00000423288 2910 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDCD1Q15116 RNU6-694P-201ENST00000364071 147 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 SNORA51.2-201ENST00000364595 132 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 Y_RNA.530-201ENST00000384587 101 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 AL078599.1-201ENST00000402075 293 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 Y_RNA.615-201ENST00000410769 117 ntBASIC4.21□□□□□ -1.74
PDCD1Q15116 AC080125.1-201ENST00000414888 684 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms