Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 Z99714.1-201ENST00000450463 807 ntBASIC1.04□□□□□ -2.24
LRP1Q07954 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.04□□□□□ -2.24
LRP1Q07954 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LRP1Q07954 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LRP1Q07954 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.04□□□□□ -2.24
LRP1Q07954 AC024560.3-201ENST00000608482 349 ntBASIC1.04□□□□□ -2.24
LRP1Q07954 SNORA50A-202ENST00000629536 136 ntBASIC1.04□□□□□ -2.24
LRP1Q07954 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LRP1Q07954 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
LRP1Q07954 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.04□□□□□ -2.24
LRP1Q07954 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
LRP1Q07954 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
LRP1Q07954 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
LRP1Q07954 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 AC106901.1-201ENST00000425086 698 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.03□□□□□ -2.24
LRP1Q07954 COX6CP5-201ENST00000527162 228 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AC234775.3-201ENST00000564612 656 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AL356280.1-201ENST00000603614 379 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AL512598.1-201ENST00000610158 273 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AC025048.6-202ENST00000627667 438 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
LRP1Q07954 AL355578.1-201ENST00000607405 1328 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 RNA5SP239-201ENST00000410218 129 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 DPPA2P1-201ENST00000428060 556 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.03□□□□□ -2.24
LRP1Q07954 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.03□□□□□ -2.24
LRP1Q07954 AC015720.1-201ENST00000565251 277 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 RPS3AP23-202ENST00000574601 686 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 RNU6-174P-201ENST00000410406 106 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 HMGN2P38-201ENST00000423806 265 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AC025033.1-201ENST00000463883 194 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 ATP5EP1-201ENST00000510257 156 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 RPL21P5-201ENST00000554662 472 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 AC034268.2-201ENST00000571784 482 ntBASIC1.03□□□□□ -2.24
LRP1Q07954 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.03□□□□□ -2.24
LRP1Q07954 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
LRP1Q07954 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
LRP1Q07954 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
LRP1Q07954 BTBD10P2-201ENST00000404779 676 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 RNA5SP38-201ENST00000410750 119 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 EIF1AXP1-201ENST00000419267 435 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 AMD1P1-201ENST00000457220 922 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
LRP1Q07954 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.03□□□□□ -2.25
LRP1Q07954 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.03□□□□□ -2.25
LRP1Q07954 ABI1P1-201ENST00000603375 1120 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 AC080078.3-201ENST00000605407 463 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 AC098679.5-201ENST00000624394 571 ntBASIC1.03□□□□□ -2.25
LRP1Q07954 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 AC005517.2-201ENST00000424673 553 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 RWDD4P2-201ENST00000426392 563 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.02□□□□□ -2.25
LRP1Q07954 RWDD4P1-201ENST00000488019 565 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 HMGN1P7-201ENST00000491722 313 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 MTCYBP37-201ENST00000510642 1133 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AP002748.2-201ENST00000528671 348 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.02□□□□□ -2.25
LRP1Q07954 PTP4A1P6-201ENST00000531034 478 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.02□□□□□ -2.25
LRP1Q07954 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.02□□□□□ -2.25
LRP1Q07954 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
LRP1Q07954 RNU6-60P-201ENST00000364792 103 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 RNA5SP160-201ENST00000364866 120 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AL513331.1-201ENST00000411908 397 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 HMGB1P27-201ENST00000431429 603 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 COX6CP12-201ENST00000446748 202 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 RNA5SP402-201ENST00000517148 110 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.02□□□□□ -2.25
LRP1Q07954 AL121594.5-201ENST00000631724 573 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
LRP1Q07954 U8.9-201ENST00000365667 134 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.02□□□□□ -2.25
LRP1Q07954 snoU109.4-201ENST00000458953 143 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AC090255.1-201ENST00000495779 349 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.02□□□□□ -2.25
LRP1Q07954 AC090819.1-201ENST00000523800 1111 ntBASIC1.02□□□□□ -2.25
LRP1Q07954 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.02□□□□□ -2.25
LRP1Q07954 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
LRP1Q07954 RNU6-178P-201ENST00000384631 104 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 MIR625-201ENST00000385047 85 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 TOMM22P1-201ENST00000418578 312 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 AC023128.2-201ENST00000420880 1223 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.01□□□□□ -2.25
LRP1Q07954 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.01□□□□□ -2.25
LRP1Q07954 SNORA25.15-201ENST00000516487 89 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 NIFKP8-201ENST00000560500 874 ntBASIC1.01□□□□□ -2.25
LRP1Q07954 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms