Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RPL23AP83-201ENST00000434984 473 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CALD1Q05682 RPL7P52-201ENST00000449200 742 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.98□□□□□ -1.77
CALD1Q05682 MTND1P16-201ENST00000465177 898 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CALD1Q05682 AC023424.2-201ENST00000493479 777 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 GTF2IP9-201ENST00000502460 301 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 XKRY-201ENST00000510392 1100 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.98□□□□□ -1.77
CALD1Q05682 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.98□□□□□ -1.77
CALD1Q05682 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.98□□□□□ -1.77
CALD1Q05682 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.98□□□□□ -1.77
CALD1Q05682 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.98□□□□□ -1.77
CALD1Q05682 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.98□□□□□ -1.77
CALD1Q05682 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.98□□□□□ -1.77
CALD1Q05682 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.98□□□□□ -1.77
CALD1Q05682 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.98□□□□□ -1.77
CALD1Q05682 HSPE1P3-201ENST00000559254 309 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 H3F3AP1-201ENST00000559984 334 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.98□□□□□ -1.77
CALD1Q05682 MIR4474-201ENST00000579189 78 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 AL627309.6-201ENST00000606857 840 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 AL590240.3-201ENST00000621416 943 ntBASIC3.98□□□□□ -1.77
CALD1Q05682 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CALD1Q05682 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALD1Q05682 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALD1Q05682 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CALD1Q05682 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.97□□□□□ -1.77
CALD1Q05682 Y_RNA.465-201ENST00000384293 102 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 MIR887-201ENST00000401258 79 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AL139281.1-201ENST00000422120 335 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 ATP5F1P1-201ENST00000433775 569 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 HMGB1P12-201ENST00000438594 598 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.97□□□□□ -1.77
CALD1Q05682 RPL21P2-201ENST00000440049 481 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AL671855.1-201ENST00000446875 1203 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 PTENP1-201ENST00000447117 1215 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.97□□□□□ -1.77
CALD1Q05682 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.97□□□□□ -1.77
CALD1Q05682 AC146507.2-201ENST00000460608 476 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 MTCO3P35-201ENST00000485582 781 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AC090453.1-201ENST00000495560 436 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CALD1Q05682 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.97□□□□□ -1.77
CALD1Q05682 AL512347.1-201ENST00000566420 503 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AC010653.1-201ENST00000571108 881 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.97□□□□□ -1.77
CALD1Q05682 AC006023.2-201ENST00000609916 167 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 AC090772.4-201ENST00000623599 362 ntBASIC3.97□□□□□ -1.77
CALD1Q05682 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.97□□□□□ -1.77
CALD1Q05682 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CALD1Q05682 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
CALD1Q05682 AC073325.2-201ENST00000339545 159 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 U3.6-201ENST00000363622 211 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 RPL21P3-201ENST00000395517 478 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 RNA5SP129-201ENST00000410276 118 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.96□□□□□ -1.78
CALD1Q05682 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.96□□□□□ -1.78
CALD1Q05682 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CALD1Q05682 AC007742.1-201ENST00000425789 329 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AL590233.1-201ENST00000430017 456 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 ELOCP26-201ENST00000436067 329 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.96□□□□□ -1.78
CALD1Q05682 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 RPL21P134-201ENST00000453468 483 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 NECAP1P2-201ENST00000455668 727 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 OR2A20P-203ENST00000498397 1268 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.96□□□□□ -1.78
CALD1Q05682 AC116353.3-201ENST00000511215 249 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.96□□□□□ -1.78
CALD1Q05682 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
CALD1Q05682 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.96□□□□□ -1.78
CALD1Q05682 AC027449.1-201ENST00000608890 407 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AL353748.2-201ENST00000622148 471 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 AL078595.3-201ENST00000623815 1166 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 LRRC77P-213ENST00000637727 880 ntBASIC3.96□□□□□ -1.78
CALD1Q05682 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CALD1Q05682 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CALD1Q05682 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.95□□□□□ -1.78
CALD1Q05682 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.95□□□□□ -1.78
CALD1Q05682 AL353743.1-202ENST00000431724 1695 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CALD1Q05682 DEFB109C-201ENST00000382575 264 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 DEFB109B-201ENST00000382656 264 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 RNU6-584P-201ENST00000410350 95 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 RNU2-47P-201ENST00000410649 186 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.95□□□□□ -1.78
CALD1Q05682 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.95□□□□□ -1.78
CALD1Q05682 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.95□□□□□ -1.78
CALD1Q05682 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.95□□□□□ -1.78
CALD1Q05682 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.95□□□□□ -1.78
CALD1Q05682 RPL36AP33-201ENST00000450395 310 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 Z82190.1-201ENST00000454534 490 ntBASIC3.95□□□□□ -1.78
CALD1Q05682 USP9YP25-201ENST00000457708 443 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms