Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 snoU109.1-201ENST00000459339 135 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 LARP1BP2-201ENST00000486594 519 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 RPL31P61-201ENST00000496160 376 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 VN1R104P-201ENST00000505115 1009 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC109464.2-201ENST00000510242 943 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CL1P78423 FTH1P21-201ENST00000512179 511 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 HMGN1P28-201ENST00000521340 364 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.2□□□□□ -1.9
CX3CL1P78423 MIR3118-1-201ENST00000581787 76 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 CKS1BP3-201ENST00000600888 237 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC015871.2-201ENST00000603605 948 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AL590392.1-201ENST00000604960 446 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 RNU6-87P-201ENST00000607561 108 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC090970.3-201ENST00000612566 866 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC093838.1-201ENST00000613014 469 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC008121.2-201ENST00000614647 523 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC112484.5-201ENST00000624189 228 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 AL773545.4-201ENST00000637262 310 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 MIR492-201ENST00000638676 116 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 AL513478.4-201ENST00000641636 310 ntBASIC3.2□□□□□ -1.9
CX3CL1P78423 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.2□□□□□ -1.9
CX3CL1P78423 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CX3CL1P78423 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CX3CL1P78423 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CL1P78423 DDX10P1-201ENST00000448545 1933 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CX3CL1P78423 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC068538.1-201ENST00000376856 336 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 HMGN2P8-201ENST00000391458 268 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AL109755.1-201ENST00000401791 649 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 CRYBB2P1-203ENST00000415709 538 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AL589823.1-201ENST00000429577 183 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 RN7SL860P-201ENST00000473738 223 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 MTND1P3-201ENST00000484956 952 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC068305.1-201ENST00000497406 726 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CL1P78423 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 MTND3P5-201ENST00000512798 333 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 SNORA31.8-201ENST00000516327 108 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 DEFB108A-201ENST00000530110 222 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.19□□□□□ -1.9
CX3CL1P78423 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 GNRHR2P1-201ENST00000555315 631 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 PARP1P2-201ENST00000556806 195 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC022968.1-201ENST00000567372 442 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC103987.3-201ENST00000582071 292 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.19□□□□□ -1.9
CX3CL1P78423 RNU4-89P-201ENST00000607443 133 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC103591.3-201ENST00000608684 209 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC006566.1-201ENST00000608943 513 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 MIR6867-201ENST00000610636 67 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 MIR6868-201ENST00000611215 58 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC245517.5-201ENST00000611529 162 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC091304.9-201ENST00000612091 226 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC100793.4-201ENST00000613683 429 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 TUG1_2.1-201ENST00000614234 87 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AP001506.1-201ENST00000615444 211 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 AC139792.2-201ENST00000624218 587 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 GABPAP-201ENST00000419271 1356 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms