Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC012497.1-201ENST00000429392 575 ntBASIC2.63□□□□□ -1.99
TPM4P67936 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM4P67936 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM4P67936 PNPLA4P1-201ENST00000458328 305 ntBASIC2.63□□□□□ -1.99
TPM4P67936 AC092798.1-201ENST00000458542 409 ntBASIC2.63□□□□□ -1.99
TPM4P67936 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TPM4P67936 AC104108.1-201ENST00000509930 412 ntBASIC2.63□□□□□ -1.99
TPM4P67936 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.63□□□□□ -1.99
TPM4P67936 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
TPM4P67936 CASP1P1-201ENST00000526345 212 ntBASIC2.63□□□□□ -1.99
TPM4P67936 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM4P67936 AC078814.3-201ENST00000553036 491 ntBASIC2.63□□□□□ -1.99
TPM4P67936 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.63□□□□□ -1.99
TPM4P67936 OR1M4P-201ENST00000589199 287 ntBASIC2.63□□□□□ -1.99
TPM4P67936 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM4P67936 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM4P67936 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM4P67936 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM4P67936 OR8B1P-202ENST00000641132 1178 ntBASIC2.63□□□□□ -1.99
TPM4P67936 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TPM4P67936 RNA5SP27-201ENST00000363839 119 ntBASIC2.62□□□□□ -1.99
TPM4P67936 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.62□□□□□ -1.99
TPM4P67936 AL359511.1-201ENST00000402970 211 ntBASIC2.62□□□□□ -1.99
TPM4P67936 RPL27AP8-201ENST00000424277 446 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM4P67936 MTATP6P11-201ENST00000428071 670 ntBASIC2.62□□□□□ -1.99
TPM4P67936 RPS26P30-201ENST00000443431 335 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.62□□□□□ -1.99
TPM4P67936 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.62□□□□□ -1.99
TPM4P67936 RPL36AP51-201ENST00000487216 318 ntBASIC2.62□□□□□ -1.99
TPM4P67936 RPS15AP34-201ENST00000487776 387 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM4P67936 SETP12-201ENST00000514068 805 ntBASIC2.62□□□□□ -1.99
TPM4P67936 RNA5SP320-201ENST00000516263 124 ntBASIC2.62□□□□□ -1.99
TPM4P67936 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
TPM4P67936 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AC113192.3-201ENST00000529152 742 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.62□□□□□ -1.99
TPM4P67936 LSM6P2-201ENST00000552208 177 ntBASIC2.62□□□□□ -1.99
TPM4P67936 ISCA1P3-201ENST00000577104 373 ntBASIC2.62□□□□□ -1.99
TPM4P67936 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM4P67936 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.62□□□□□ -1.99
TPM4P67936 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM4P67936 AP002826.1-201ENST00000608835 315 ntBASIC2.62□□□□□ -1.99
TPM4P67936 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.62□□□□□ -1.99
TPM4P67936 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
TPM4P67936 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TPM4P67936 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM4P67936 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM4P67936 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TPM4P67936 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TPM4P67936 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM4P67936 SNORD82-201ENST00000365530 70 ntBASIC2.61□□□□□ -1.99
TPM4P67936 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TPM4P67936 AL513475.1-201ENST00000406602 315 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.61□□□□□ -1.99
TPM4P67936 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM4P67936 MTND1P23-201ENST00000416931 372 ntBASIC2.61□□□□□ -1.99
TPM4P67936 FCF1P1-201ENST00000432690 571 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC009296.1-201ENST00000443146 155 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AL358232.1-201ENST00000448030 501 ntBASIC2.61□□□□□ -1.99
TPM4P67936 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM4P67936 RPL31P41-201ENST00000477967 372 ntBASIC2.61□□□□□ -1.99
TPM4P67936 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.61□□□□□ -1.99
TPM4P67936 RNA5SP24-201ENST00000516478 95 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AP000889.2-201ENST00000532684 490 ntBASIC2.61□□□□□ -1.99
TPM4P67936 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.61□□□□□ -1.99
TPM4P67936 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM4P67936 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM4P67936 MIR3944-201ENST00000581277 108 ntBASIC2.61□□□□□ -1.99
TPM4P67936 MIR5195-201ENST00000583555 115 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC010738.1-201ENST00000604970 987 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC025588.4-201ENST00000615802 908 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC009318.4-201ENST00000620496 486 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AL137790.1-201ENST00000634283 177 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
TPM4P67936 AC069528.2-201ENST00000624849 1991 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AL359693.1-201ENST00000614959 2407 ntBASIC2.61□□□□□ -1.99
TPM4P67936 CKAP2P1-201ENST00000555477 2049 ntBASIC2.61□□□□□ -1.99
TPM4P67936 AC007342.9-201ENST00000623877 1385 ntBASIC2.61□□□□□ -1.99
TPM4P67936 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.61□□□□□ -1.99
TPM4P67936 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 NUP58P1-201ENST00000502546 1738 ntBASIC2.6□□□□□ -1.99
TPM4P67936 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TPM4P67936 RNU6-301P-201ENST00000384277 107 ntBASIC2.6□□□□□ -1.99
TPM4P67936 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.6□□□□□ -1.99
TPM4P67936 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM4P67936 AC091390.3-201ENST00000426478 338 ntBASIC2.6□□□□□ -1.99
TPM4P67936 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.6□□□□□ -1.99
TPM4P67936 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.6□□□□□ -1.99
TPM4P67936 RNA5SP471-201ENST00000516971 106 ntBASIC2.6□□□□□ -1.99
TPM4P67936 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.6□□□□□ -1.99
TPM4P67936 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
TPM4P67936 AC012414.2-201ENST00000559474 187 ntBASIC2.6□□□□□ -1.99
TPM4P67936 ATP5F1P7-201ENST00000567330 760 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms