Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 RNA5SP258-201ENST00000362750 119 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 RNY3P3-201ENST00000363816 102 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 RNU4-1-201ENST00000363925 141 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 Y_RNA.279-201ENST00000364763 95 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERVK_113P62684 RPS4XP8-201ENST00000402039 771 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 RNU6ATAC-201ENST00000408749 126 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 OR9R1P-201ENST00000412200 877 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 RPL23AP30-201ENST00000432419 501 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 RPL23AP46-201ENST00000438548 490 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 RPL7L1P1-201ENST00000448259 785 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AP000942.1-201ENST00000463969 747 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 RPL23AP41-201ENST00000484754 458 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 MTCO2P30-201ENST00000503662 364 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AC006064.5-201ENST00000541782 248 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AL606490.9-201ENST00000603331 271 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AC087045.1-201ENST00000605856 382 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.85□□□□□ -1.63
HERVK_113P62684 AL138721.1-201ENST00000616756 179 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AC007742.2-201ENST00000618226 398 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 MIR6075-201ENST00000620782 95 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AC039056.2-201ENST00000622261 511 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 AC093648.1-201ENST00000623546 606 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.85□□□□□ -1.63
HERVK_113P62684 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HERVK_113P62684 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.85□□□□□ -1.63
HERVK_113P62684 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.85□□□□□ -1.63
HERVK_113P62684 ASNSP1-201ENST00000518311 1939 ntBASIC4.85□□□□□ -1.63
HERVK_113P62684 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERVK_113P62684 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HERVK_113P62684 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
HERVK_113P62684 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 FAM91A3P-201ENST00000456826 2544 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 CKAP2P1-201ENST00000555477 2049 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.84□□□□□ -1.63
HERVK_113P62684 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HERVK_113P62684 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 RNU6-1120P-201ENST00000362988 108 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 Y_RNA.263-201ENST00000364659 114 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 RNU6-169P-201ENST00000365336 107 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 RNU2-21P-201ENST00000410368 188 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 RNA5SP44-201ENST00000410446 133 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AL445584.1-201ENST00000431451 330 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 GPR143P-201ENST00000434155 205 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 RPS20P20-201ENST00000460498 340 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC083798.1-201ENST00000472671 131 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC010683.1-201ENST00000473673 378 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 RPS29P19-201ENST00000479709 171 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.84□□□□□ -1.63
HERVK_113P62684 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AC022655.2-201ENST00000577280 318 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.84□□□□□ -1.63
HERVK_113P62684 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.84□□□□□ -1.63
HERVK_113P62684 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.84□□□□□ -1.63
HERVK_113P62684 RMST_3.1-201ENST00000611651 109 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 AC010133.1-201ENST00000615809 842 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 MIR7151-201ENST00000617477 60 ntBASIC4.84□□□□□ -1.63
HERVK_113P62684 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.84□□□□□ -1.63
HERVK_113P62684 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERVK_113P62684 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.84□□□□□ -1.64
HERVK_113P62684 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HERVK_113P62684 AC093535.2-201ENST00000624769 2326 ntBASIC4.84□□□□□ -1.64
HERVK_113P62684 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.84□□□□□ -1.64
HERVK_113P62684 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.84□□□□□ -1.64
HERVK_113P62684 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
HERVK_113P62684 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HERVK_113P62684 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.83□□□□□ -1.64
HERVK_113P62684 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RNU6-451P-201ENST00000362921 107 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RNU4-44P-201ENST00000363050 141 ntBASIC4.83□□□□□ -1.64
HERVK_113P62684 RNVU1-3-201ENST00000364313 161 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms