Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 PRDX3P3-201ENST00000447765 522 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 TRGVB-201ENST00000453257 471 ntBASIC3.07□□□□□ -1.92
LMO4P61968 SNRPFP4-201ENST00000456366 242 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC013267.1-201ENST00000458227 267 ntBASIC3.07□□□□□ -1.92
LMO4P61968 RPS3AP17-201ENST00000472594 777 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL136126.1-201ENST00000473603 402 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC092989.1-201ENST00000481235 277 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC013828.1-201ENST00000481845 158 ntBASIC3.07□□□□□ -1.92
LMO4P61968 LARP1BP2-201ENST00000486594 519 ntBASIC3.07□□□□□ -1.92
LMO4P61968 HMGB1P36-201ENST00000487709 576 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC078817.1-201ENST00000492623 435 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 AF131216.2-201ENST00000512316 564 ntBASIC3.07□□□□□ -1.92
LMO4P61968 ARL2BPP6-201ENST00000512757 439 ntBASIC3.07□□□□□ -1.92
LMO4P61968 FTH1P9-201ENST00000513251 355 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.07□□□□□ -1.92
LMO4P61968 RNU6-430P-201ENST00000517078 107 ntBASIC3.07□□□□□ -1.92
LMO4P61968 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
LMO4P61968 OR5B10P-201ENST00000532869 642 ntBASIC3.07□□□□□ -1.92
LMO4P61968 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO4P61968 AC135001.1-201ENST00000544546 283 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO4P61968 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO4P61968 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC141257.3-201ENST00000572906 215 ntBASIC3.07□□□□□ -1.92
LMO4P61968 MIR5697-201ENST00000578045 78 ntBASIC3.07□□□□□ -1.92
LMO4P61968 VN1R79P-201ENST00000593540 513 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL356055.1-201ENST00000602528 446 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AL355812.1-201ENST00000603215 216 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 AC092954.2-201ENST00000609103 430 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC103710.4-201ENST00000609301 899 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC004825.2-201ENST00000616634 455 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC009237.17-201ENST00000618111 748 ntBASIC3.07□□□□□ -1.92
LMO4P61968 AC104985.2-201ENST00000620598 500 ntBASIC3.07□□□□□ -1.92
LMO4P61968 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.07□□□□□ -1.92
LMO4P61968 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.07□□□□□ -1.92
LMO4P61968 MIR3688-2-201ENST00000636963 87 ntBASIC3.07□□□□□ -1.92
LMO4P61968 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.07□□□□□ -1.92
LMO4P61968 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LMO4P61968 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.07□□□□□ -1.92
LMO4P61968 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LMO4P61968 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LMO4P61968 AC007685.1-201ENST00000329806 452 ntBASIC3.06□□□□□ -1.92
LMO4P61968 SNRPEP3-201ENST00000338402 276 ntBASIC3.06□□□□□ -1.92
LMO4P61968 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LMO4P61968 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 Y_RNA.333-201ENST00000365274 102 ntBASIC3.06□□□□□ -1.92
LMO4P61968 MIR506-201ENST00000384998 124 ntBASIC3.06□□□□□ -1.92
LMO4P61968 MIR218-2-201ENST00000385006 110 ntBASIC3.06□□□□□ -1.92
LMO4P61968 U8.14-201ENST00000390843 143 ntBASIC3.06□□□□□ -1.92
LMO4P61968 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 MIR1277-201ENST00000408536 78 ntBASIC3.06□□□□□ -1.92
LMO4P61968 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LMO4P61968 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.06□□□□□ -1.92
LMO4P61968 AC233728.2-201ENST00000425348 757 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 ZYG11AP1-201ENST00000430329 837 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 MTATP6P30-201ENST00000443540 664 ntBASIC3.06□□□□□ -1.92
LMO4P61968 RPL7P36-201ENST00000444633 681 ntBASIC3.06□□□□□ -1.92
LMO4P61968 GDI2P2-201ENST00000445131 608 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 RPL21P23-201ENST00000446654 460 ntBASIC3.06□□□□□ -1.92
LMO4P61968 NFU1P2-201ENST00000448700 469 ntBASIC3.06□□□□□ -1.92
LMO4P61968 MTND2P24-201ENST00000453434 806 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AL033528.1-201ENST00000453780 140 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.06□□□□□ -1.92
LMO4P61968 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.06□□□□□ -1.92
LMO4P61968 AC078918.1-201ENST00000498515 228 ntBASIC3.06□□□□□ -1.92
LMO4P61968 OR5H5P-201ENST00000503164 928 ntBASIC3.06□□□□□ -1.92
LMO4P61968 KLRA1P-201ENST00000503499 986 ntBASIC3.06□□□□□ -1.92
LMO4P61968 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.06□□□□□ -1.92
LMO4P61968 AC098799.2-201ENST00000509466 868 ntBASIC3.06□□□□□ -1.92
LMO4P61968 MTCO3P44-201ENST00000510977 541 ntBASIC3.06□□□□□ -1.92
LMO4P61968 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms