Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NUTF2P7-201ENST00000453086 375 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC092155.2-201ENST00000454675 477 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.15□□□□□ -2.07
AP3S2P59780 KLRA1P-201ENST00000503499 986 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC147055.4-201ENST00000504399 745 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC093767.1-201ENST00000504523 156 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.15□□□□□ -2.07
AP3S2P59780 AC112673.1-201ENST00000513168 575 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 ZNF705CP-201ENST00000530515 889 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.15□□□□□ -2.07
AP3S2P59780 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.15□□□□□ -2.07
AP3S2P59780 AGGF1P5-201ENST00000567900 919 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC068135.2-201ENST00000569293 1028 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC006539.2-201ENST00000601729 572 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 OR10AB1P-201ENST00000609613 938 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 MIR7112-201ENST00000616126 65 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AL449363.1-201ENST00000617815 186 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 AC091925.2-201ENST00000625059 256 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
AP3S2P59780 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
AP3S2P59780 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
AP3S2P59780 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
AP3S2P59780 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
AP3S2P59780 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.14□□□□□ -2.07
AP3S2P59780 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
AP3S2P59780 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
AP3S2P59780 RNA5SP27-201ENST00000363839 119 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 MIR554-201ENST00000384874 96 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 RNU6-920P-201ENST00000410926 92 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 UBE2V1P11-201ENST00000411559 285 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 RAC1P7-201ENST00000445367 377 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AP3S2P59780 CEACAMP10-202ENST00000495431 496 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 AC118942.1-201ENST00000529674 1035 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.14□□□□□ -2.07
AP3S2P59780 ATP5F1P7-201ENST00000567330 760 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 MIR3160-1-201ENST00000577972 85 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.14□□□□□ -2.07
AP3S2P59780 AC013444.2-201ENST00000603317 787 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 AC025594.3-201ENST00000613068 790 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 U4.3-201ENST00000621047 82 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
AP3S2P59780 MIR7515-201ENST00000637837 67 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 OR5H6-203ENST00000642105 978 ntBASIC2.14□□□□□ -2.07
AP3S2P59780 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.14□□□□□ -2.07
AP3S2P59780 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
AP3S2P59780 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
AP3S2P59780 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
AP3S2P59780 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.14□□□□□ -2.07
AP3S2P59780 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.13□□□□□ -2.07
AP3S2P59780 MTCO1P12-201ENST00000414273 1543 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 HMGB1P5-201ENST00000255320 642 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 RNA5SP456-201ENST00000364002 114 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 SNORD51-201ENST00000384320 80 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AL355615.1-201ENST00000406187 641 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.13□□□□□ -2.07
AP3S2P59780 GTF2IP20-201ENST00000431663 360 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.13□□□□□ -2.07
AP3S2P59780 ARF4P4-201ENST00000439608 520 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 RPL23AP16-201ENST00000441715 421 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AL592447.1-201ENST00000447592 540 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 TRGVB-201ENST00000453257 471 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AC097493.1-201ENST00000463958 372 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AC107626.1-201ENST00000471084 183 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
AP3S2P59780 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.13□□□□□ -2.07
AP3S2P59780 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.13□□□□□ -2.07
AP3S2P59780 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.13□□□□□ -2.07
AP3S2P59780 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
AP3S2P59780 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
AP3S2P59780 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
AP3S2P59780 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
AP3S2P59780 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
AP3S2P59780 NPM1P10-201ENST00000398310 865 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 AC007560.1-201ENST00000426912 237 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 ATP5F1P1-201ENST00000433775 569 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3S2P59780 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3S2P59780 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3S2P59780 AL591503.2-201ENST00000442314 1005 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.12□□□□□ -2.07
AP3S2P59780 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3S2P59780 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
AP3S2P59780 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.12□□□□□ -2.07
AP3S2P59780 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms