Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPL32P34-201ENST00000486380 400 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC078817.1-201ENST00000492623 435 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC106872.3-201ENST00000495104 446 ntBASIC3.44□□□□□ -1.86
PDX1P52945 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.44□□□□□ -1.86
PDX1P52945 POU5F1P7-201ENST00000508759 541 ntBASIC3.44□□□□□ -1.86
PDX1P52945 TXNP6-201ENST00000510190 310 ntBASIC3.44□□□□□ -1.86
PDX1P52945 OR5BM1P-201ENST00000512021 366 ntBASIC3.44□□□□□ -1.86
PDX1P52945 RNU6-714P-201ENST00000516963 103 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AP004371.1-201ENST00000525240 214 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 SETP7-201ENST00000552169 453 ntBASIC3.44□□□□□ -1.86
PDX1P52945 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.44□□□□□ -1.86
PDX1P52945 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
PDX1P52945 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.44□□□□□ -1.86
PDX1P52945 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.44□□□□□ -1.86
PDX1P52945 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 AL365503.1-201ENST00000605247 905 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC092354.1-201ENST00000606057 376 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AL031775.1-201ENST00000607014 887 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC011816.2-201ENST00000607089 556 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC008443.7-201ENST00000622195 246 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC026422.1-201ENST00000623961 452 ntBASIC3.44□□□□□ -1.86
PDX1P52945 AC127502.3-201ENST00000636170 1206 ntBASIC3.44□□□□□ -1.86
PDX1P52945 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.44□□□□□ -1.86
PDX1P52945 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
PDX1P52945 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDX1P52945 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.44□□□□□ -1.86
PDX1P52945 AC244517.1-201ENST00000606030 2086 ntBASIC3.43□□□□□ -1.86
PDX1P52945 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
PDX1P52945 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 U8.14-201ENST00000390843 143 ntBASIC3.43□□□□□ -1.86
PDX1P52945 SNORD17-201ENST00000390930 237 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC109780.2-201ENST00000413467 845 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 AL365184.2-201ENST00000431139 435 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 SETP8-201ENST00000435341 628 ntBASIC3.43□□□□□ -1.86
PDX1P52945 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDX1P52945 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 RPL21P10-201ENST00000463521 490 ntBASIC3.43□□□□□ -1.86
PDX1P52945 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 RPS29P2-201ENST00000479278 136 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 AC017037.2-201ENST00000513850 890 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC008489.1-201ENST00000524271 483 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC068587.4-201ENST00000533893 186 ntBASIC3.43□□□□□ -1.86
PDX1P52945 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 AL121766.1-201ENST00000547436 487 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.43□□□□□ -1.86
PDX1P52945 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.43□□□□□ -1.86
PDX1P52945 RPL21P12-201ENST00000559810 515 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 AC008507.1-201ENST00000587506 734 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 KLKP1-201ENST00000595979 403 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC128687.1-201ENST00000605304 619 ntBASIC3.43□□□□□ -1.86
PDX1P52945 YPEL5P2-201ENST00000605553 359 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC055876.5-201ENST00000605667 259 ntBASIC3.43□□□□□ -1.86
PDX1P52945 MIR7851-201ENST00000610611 160 ntBASIC3.43□□□□□ -1.86
PDX1P52945 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 AC244205.2-202ENST00000635781 342 ntBASIC3.43□□□□□ -1.86
PDX1P52945 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDX1P52945 AC006378.2-201ENST00000623178 2476 ntBASIC3.43□□□□□ -1.86
PDX1P52945 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.43□□□□□ -1.86
PDX1P52945 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.42□□□□□ -1.86
PDX1P52945 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PDX1P52945 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.42□□□□□ -1.86
PDX1P52945 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.42□□□□□ -1.86
PDX1P52945 ELL2P3-201ENST00000457883 1602 ntBASIC3.42□□□□□ -1.86
PDX1P52945 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDX1P52945 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PDX1P52945 RNU4-21P-201ENST00000362802 126 ntBASIC3.42□□□□□ -1.86
PDX1P52945 RNU6-501P-201ENST00000364072 100 ntBASIC3.42□□□□□ -1.86
PDX1P52945 RNU6-853P-201ENST00000364306 107 ntBASIC3.42□□□□□ -1.86
PDX1P52945 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.42□□□□□ -1.86
PDX1P52945 RNU6-1207P-201ENST00000384343 107 ntBASIC3.42□□□□□ -1.86
PDX1P52945 SNORA48.2-201ENST00000390926 124 ntBASIC3.42□□□□□ -1.86
PDX1P52945 SKINT1L-201ENST00000401057 817 ntBASIC3.42□□□□□ -1.86
PDX1P52945 SNORA11.2-201ENST00000408318 127 ntBASIC3.42□□□□□ -1.86
PDX1P52945 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.42□□□□□ -1.86
PDX1P52945 BX842559.1-201ENST00000419615 532 ntBASIC3.42□□□□□ -1.86
PDX1P52945 Z99497.1-201ENST00000421282 135 ntBASIC3.42□□□□□ -1.86
PDX1P52945 MED14P1-201ENST00000430517 648 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms