Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
GTF2A1P52655 RNU6-859P-201ENST00000362728 107 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RNU6-1249P-201ENST00000363237 111 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RNU6-234P-201ENST00000365229 104 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
GTF2A1P52655 MIR27B-201ENST00000385129 97 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 MIR493-201ENST00000385254 89 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 GSTA9P-201ENST00000406231 611 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RNU6-920P-201ENST00000410926 92 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RPL21P133-201ENST00000443666 476 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.11□□□□□ -2.07
GTF2A1P52655 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.11□□□□□ -2.07
GTF2A1P52655 RPL23AP15-201ENST00000450202 459 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 SNORD109B-201ENST00000458961 67 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 SNORD109A-201ENST00000459128 67 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RPL31P41-201ENST00000477967 372 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 XKRY-201ENST00000510392 1100 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RN7SKP24-201ENST00000515888 284 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 RNA5SP320-201ENST00000516263 124 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.11□□□□□ -2.07
GTF2A1P52655 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
GTF2A1P52655 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.11□□□□□ -2.07
GTF2A1P52655 VN1R90P-201ENST00000595717 726 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 AL355812.1-201ENST00000603215 216 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
GTF2A1P52655 AC025594.3-201ENST00000613068 790 ntBASIC2.11□□□□□ -2.07
GTF2A1P52655 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.11□□□□□ -2.07
GTF2A1P52655 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
GTF2A1P52655 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.11□□□□□ -2.07
GTF2A1P52655 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.1□□□□□ -2.07
GTF2A1P52655 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AL139039.1-201ENST00000401900 692 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 HMGB1P11-201ENST00000413899 637 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AL392003.1-201ENST00000434394 243 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AL359385.1-201ENST00000456509 365 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC092798.1-201ENST00000458542 409 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC011825.1-201ENST00000484967 388 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
GTF2A1P52655 COX6CP8-201ENST00000522620 226 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.1□□□□□ -2.07
GTF2A1P52655 CKS1BP1-201ENST00000555221 240 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC023158.1-201ENST00000561632 1025 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AC009314.1-201ENST00000603871 304 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC012468.1-201ENST00000604888 430 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC073111.2-201ENST00000605657 1075 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC004908.2-201ENST00000609090 574 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC104307.1-201ENST00000616142 196 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AC097372.4-201ENST00000625025 466 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.1□□□□□ -2.07
GTF2A1P52655 AL137790.1-201ENST00000634283 177 ntBASIC2.1□□□□□ -2.07
GTF2A1P52655 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AL390862.1-201ENST00000635467 1469 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
GTF2A1P52655 RNU4-31P-201ENST00000384211 141 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 RNA5SP171-201ENST00000391071 115 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.09□□□□□ -2.07
GTF2A1P52655 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 OFD1P18Y-201ENST00000420889 959 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 ARL5AP4-201ENST00000430731 512 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 RPL36P19-201ENST00000430744 301 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 FCF1P1-201ENST00000432690 571 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AC044797.1-201ENST00000445744 679 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 ANKRD26P4-201ENST00000455755 950 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AC096751.1-202ENST00000502691 1067 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC105252.1-201ENST00000503089 286 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 CBX3P3-201ENST00000508108 532 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 PRELID3BP4-201ENST00000515476 571 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AP005205.1-201ENST00000563503 508 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC105137.2-201ENST00000569073 466 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC022662.1-201ENST00000580252 331 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AL109918.3-201ENST00000603072 338 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 ATP1B3P1-201ENST00000605365 821 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AC107294.1-201ENST00000609524 467 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.09□□□□□ -2.07
GTF2A1P52655 AL590099.1-201ENST00000615276 138 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
GTF2A1P52655 OR1S1-201ENST00000624470 978 ntBASIC2.09□□□□□ -2.07
GTF2A1P52655 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.09□□□□□ -2.07
GTF2A1P52655 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
GTF2A1P52655 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
GTF2A1P52655 MTND4P27-201ENST00000450813 1354 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms