Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDR1P51861 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDR1P51861 CASC19-284ENST00000642142 1868 ntBASIC5□□□□□ -1.61
CDR1P51861 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDR1P51861 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 MTCO1P12-201ENST00000414273 1543 ntBASIC4.99□□□□□ -1.61
CDR1P51861 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDR1P51861 RNU6-984P-201ENST00000363236 109 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RNY1P12-201ENST00000364251 105 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RNU6-744P-201ENST00000365557 107 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RNU6-1316P-201ENST00000384242 108 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RNU6-831P-201ENST00000384548 107 ntBASIC4.99□□□□□ -1.61
CDR1P51861 MIR1-2-201ENST00000384961 85 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RN7SKP58-201ENST00000411010 305 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AL160275.2-201ENST00000412010 394 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC113618.1-201ENST00000416747 285 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC009302.1-201ENST00000417147 390 ntBASIC4.99□□□□□ -1.61
CDR1P51861 HSPE1P1-201ENST00000421494 318 ntBASIC4.99□□□□□ -1.61
CDR1P51861 C4BPAP2-201ENST00000428434 478 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC010881.1-201ENST00000433830 235 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AL451139.1-201ENST00000434718 346 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.99□□□□□ -1.61
CDR1P51861 AC010469.1-201ENST00000463864 576 ntBASIC4.99□□□□□ -1.61
CDR1P51861 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.99□□□□□ -1.61
CDR1P51861 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
CDR1P51861 AC104563.1-201ENST00000476147 376 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC012158.1-204ENST00000483430 465 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AL163973.1-201ENST00000484753 577 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AP001025.2-201ENST00000490908 477 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AK3P4-201ENST00000504283 583 ntBASIC4.99□□□□□ -1.61
CDR1P51861 HMGB3P15-201ENST00000507326 574 ntBASIC4.99□□□□□ -1.61
CDR1P51861 Y_RNA.720-201ENST00000517166 92 ntBASIC4.99□□□□□ -1.61
CDR1P51861 RNU6-794P-201ENST00000517261 64 ntBASIC4.99□□□□□ -1.61
CDR1P51861 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.99□□□□□ -1.61
CDR1P51861 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.99□□□□□ -1.61
CDR1P51861 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.99□□□□□ -1.61
CDR1P51861 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.99□□□□□ -1.61
CDR1P51861 AL110118.1-201ENST00000553543 400 ntBASIC4.99□□□□□ -1.61
CDR1P51861 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.99□□□□□ -1.61
CDR1P51861 AC105129.1-201ENST00000560250 297 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.99□□□□□ -1.61
CDR1P51861 SNORD39.3-201ENST00000584451 71 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC008687.2-201ENST00000597865 520 ntBASIC4.99□□□□□ -1.61
CDR1P51861 BBIP1P1-201ENST00000602999 279 ntBASIC4.99□□□□□ -1.61
CDR1P51861 7SK.7-201ENST00000603504 247 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AP001330.4-201ENST00000604350 154 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC084781.2-201ENST00000615568 161 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.99□□□□□ -1.61
CDR1P51861 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.99□□□□□ -1.61
CDR1P51861 BMS1P21-201ENST00000634565 365 ntBASIC4.99□□□□□ -1.61
CDR1P51861 MTND4LP32-201ENST00000636111 270 ntBASIC4.99□□□□□ -1.61
CDR1P51861 U6.101-201ENST00000637707 76 ntBASIC4.99□□□□□ -1.61
CDR1P51861 OR2L1P-202ENST00000641567 1023 ntBASIC4.99□□□□□ -1.61
CDR1P51861 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
CDR1P51861 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDR1P51861 AC092447.10-201ENST00000620607 1652 ntBASIC4.99□□□□□ -1.61
CDR1P51861 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.98□□□□□ -1.61
CDR1P51861 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CDR1P51861 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 Y_RNA.231-201ENST00000364358 102 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RNU6-343P-201ENST00000364709 104 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RNU6-1318P-201ENST00000365389 103 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RNU6-996P-201ENST00000365438 107 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RPS4XP9-201ENST00000405151 780 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AL080315.1-201ENST00000406055 466 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RPL23AP48-201ENST00000406913 488 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC140479.3-201ENST00000418944 1126 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC007283.2-201ENST00000424739 197 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.98□□□□□ -1.61
CDR1P51861 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.98□□□□□ -1.61
CDR1P51861 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC079781.2-201ENST00000446424 169 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC243772.1-201ENST00000451620 410 ntBASIC4.98□□□□□ -1.61
CDR1P51861 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RNU7-152P-201ENST00000458982 64 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC010301.1-201ENST00000473936 355 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC068587.1-201ENST00000483613 781 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.98□□□□□ -1.61
CDR1P51861 RNU6-488P-201ENST00000515918 99 ntBASIC4.98□□□□□ -1.61
CDR1P51861 RNU6-123P-201ENST00000516163 102 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.98□□□□□ -1.61
CDR1P51861 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.98□□□□□ -1.61
CDR1P51861 AC107934.1-201ENST00000522215 217 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 OR4T1P-201ENST00000554933 911 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC068831.4-201ENST00000556118 109 ntBASIC4.98□□□□□ -1.61
CDR1P51861 HMGB3P26-201ENST00000560051 582 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.98□□□□□ -1.61
CDR1P51861 MIR4503-201ENST00000582187 83 ntBASIC4.98□□□□□ -1.61
CDR1P51861 MIR4715-201ENST00000584117 79 ntBASIC4.98□□□□□ -1.61
CDR1P51861 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.98□□□□□ -1.61
CDR1P51861 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.98□□□□□ -1.61
CDR1P51861 AC010680.4-201ENST00000605334 543 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms