Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RPL7P36-201ENST00000444633 681 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AL592447.1-201ENST00000447592 540 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 HMGB1P15-201ENST00000453854 435 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 MTCO1P42-201ENST00000457379 726 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AP001992.1-205ENST00000462248 379 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC104563.1-201ENST00000476147 376 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AP001025.2-201ENST00000490908 477 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCNKAP51800 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 FABP5P5-201ENST00000515537 406 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 RNU6-27P-201ENST00000516146 107 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 IGKV2-23-201ENST00000518729 323 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AC007991.1-201ENST00000522680 631 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AC006960.3-201ENST00000561845 705 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCNKAP51800 MIR4444-1-201ENST00000581696 74 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCNKAP51800 MIR4444-2-201ENST00000584390 74 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 SNORA51-201ENST00000606420 132 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
CLCNKAP51800 AC006329.2-201ENST00000611491 394 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC100793.4-201ENST00000613683 429 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 AC104010.1-201ENST00000616889 150 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 CRYM-AS1-204ENST00000637983 556 ntBASIC3.67□□□□□ -1.82
CLCNKAP51800 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCNKAP51800 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCNKAP51800 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCNKAP51800 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCNKAP51800 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCNKAP51800 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCNKAP51800 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCNKAP51800 RNU6-600P-201ENST00000362524 99 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RNA5SP295-201ENST00000362655 121 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RNU6-853P-201ENST00000364306 107 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RNU6-533P-201ENST00000384144 107 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RNU6-761P-201ENST00000384148 107 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 SNORD3H-201ENST00000384486 214 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 SOD2P1-201ENST00000396543 562 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AL663109.1-201ENST00000411498 844 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 MTCO3P41-201ENST00000414801 328 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 CRYBB2P1-203ENST00000415709 538 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.66□□□□□ -1.82
CLCNKAP51800 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 AL513174.1-201ENST00000423182 629 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC109583.1-201ENST00000432156 268 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC091862.1-201ENST00000438016 1100 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AL022238.1-201ENST00000442557 355 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 RPL7P52-201ENST00000449200 742 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RPS20P24-201ENST00000457473 361 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 TPT1P7-201ENST00000458300 517 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 RPS4XP10-201ENST00000465034 731 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCNKAP51800 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 HMGN1P11-201ENST00000508668 303 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 RN7SKP116-201ENST00000516902 319 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC022880.1-201ENST00000534017 973 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCNKAP51800 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCNKAP51800 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCNKAP51800 AL353997.4-201ENST00000586196 166 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC068790.2-201ENST00000602601 557 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AL355812.1-201ENST00000603215 216 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCNKAP51800 AC091965.4-201ENST00000607691 587 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC008121.2-201ENST00000614647 523 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC091925.2-201ENST00000625059 256 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 AC084035.1-201ENST00000634543 607 ntBASIC3.66□□□□□ -1.82
CLCNKAP51800 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLCNKAP51800 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CLCNKAP51800 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
CLCNKAP51800 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLCNKAP51800 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.82
CLCNKAP51800 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLCNKAP51800 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CLCNKAP51800 AL049780.3-201ENST00000624612 1583 ntBASIC3.65□□□□□ -1.82
CLCNKAP51800 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CLCNKAP51800 Y_RNA.234-201ENST00000364409 97 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCNKAP51800 SNORA5A-201ENST00000384111 134 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 MIR200C-201ENST00000384980 68 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 MIR449B-201ENST00000384995 97 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.65□□□□□ -1.83
CLCNKAP51800 SYF2P2-201ENST00000417620 583 ntBASIC3.65□□□□□ -1.83
CLCNKAP51800 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms