Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RNF144AP50876 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF144AP50876 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNF144AP50876 AC138907.8-201ENST00000623981 2256 ntBASIC5.43□□□□□ -1.54
RNF144AP50876 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RNF144AP50876 ZNF285B-201ENST00000561698 1767 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 Y_RNA.76-201ENST00000362931 109 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 RNU6-249P-201ENST00000363016 102 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 MIR323B-201ENST00000385269 82 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RNF144AP50876 ENSAP1-201ENST00000392855 326 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 Y_RNA.602-201ENST00000410535 92 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 MYL6P5-201ENST00000412707 459 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC092447.6-201ENST00000414578 210 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC007389.2-201ENST00000434630 306 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC097463.1-201ENST00000447288 481 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC004129.2-201ENST00000457229 287 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC009963.3-201ENST00000458090 486 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF144AP50876 RN7SL170P-201ENST00000487098 295 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF144AP50876 SEPT14P8-201ENST00000508026 178 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 RNU7-200P-201ENST00000516105 62 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 RN7SKP147-201ENST00000517154 244 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 SNRPGP16-201ENST00000533275 226 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AL442163.3-201ENST00000554110 156 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AL359219.2-201ENST00000555184 348 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 MIR4776-2-201ENST00000580204 80 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 MIR548AC-201ENST00000585049 88 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 AC008507.3-201ENST00000585753 472 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF144AP50876 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC073657.2-201ENST00000605661 303 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 U6.92-201ENST00000636464 89 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
RNF144AP50876 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
RNF144AP50876 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF144AP50876 AC012254.3-201ENST00000591183 2117 ntBASIC5.42□□□□□ -1.54
RNF144AP50876 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF144AP50876 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNF144AP50876 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNF144AP50876 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF144AP50876 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF144AP50876 AC018809.2-201ENST00000602436 3823 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF144AP50876 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF144AP50876 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF144AP50876 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
RNF144AP50876 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF144AP50876 RNU6-1027P-201ENST00000383998 107 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 MT-TC-201ENST00000387405 66 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 U3.35-201ENST00000408405 208 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 CYCSP33-201ENST00000414485 327 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 EI24P1-201ENST00000416584 867 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF144AP50876 PIGFP3-201ENST00000441918 722 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AC023141.8-201ENST00000442554 208 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF144AP50876 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF144AP50876 AC005077.1-201ENST00000449226 375 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF144AP50876 HLA-DPA3-207ENST00000454398 229 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AL445433.1-201ENST00000457507 257 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 HMGB1P25-201ENST00000468402 607 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RNF144AP50876 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF144AP50876 IGKV2-38-201ENST00000517443 247 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.41□□□□□ -1.54
RNF144AP50876 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF144AP50876 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF144AP50876 AC007458.1-201ENST00000542812 373 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms