Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL353662.3-201ENST00000625131 237 ntBASIC5.33□□□□□ -1.56
CHRNA4P43681 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA4P43681 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CHRNA4P43681 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA4P43681 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA4P43681 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 HSPA8P1-201ENST00000425843 1833 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA4P43681 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 RNU6-215P-201ENST00000365169 102 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 Y_RNA.399-201ENST00000383955 105 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 SNORA5.1-201ENST00000384275 131 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 MIR215-201ENST00000384858 110 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 MIR19A-201ENST00000384878 82 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 MIR589-201ENST00000385238 99 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 RPL31P45-201ENST00000419532 356 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 AC117503.1-201ENST00000472241 394 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 AP000797.2-201ENST00000475768 606 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA4P43681 RN7SL814P-201ENST00000487715 300 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 IGKV2-23-201ENST00000518729 323 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.32□□□□□ -1.56
CHRNA4P43681 AC109446.1-201ENST00000566172 220 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 AC106782.4-201ENST00000568264 210 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA4P43681 RPS29P30-201ENST00000600975 111 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 CDRT1-208ENST00000630868 794 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 NXPH1-205ENST00000602349 1953 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
CHRNA4P43681 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CHRNA4P43681 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA4P43681 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CHRNA4P43681 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CHRNA4P43681 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA4P43681 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA4P43681 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA4P43681 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 Z95327.2-201ENST00000414579 1873 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA4P43681 U3.2-201ENST00000362981 210 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 RNU5B-2P-201ENST00000363036 113 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 SNORD81.1-201ENST00000363064 77 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNA4P43681 MIR143-201ENST00000385300 106 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 RNU6-130P-201ENST00000411112 103 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 RNU6-387P-201ENST00000411331 105 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AL133384.1-201ENST00000412744 351 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC008280.1-201ENST00000418851 412 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.31□□□□□ -1.56
CHRNA4P43681 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA4P43681 CR769767.1-201ENST00000436337 346 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC004866.2-201ENST00000438285 481 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 RPEP5-201ENST00000441137 268 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AL031274.1-201ENST00000450334 232 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA4P43681 RNU7-167P-201ENST00000459160 62 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC006967.1-201ENST00000467608 589 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC087884.1-201ENST00000469738 328 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC087385.1-201ENST00000475062 312 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC109925.1-201ENST00000478069 331 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC068305.1-201ENST00000497406 726 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA4P43681 RNU6-323P-201ENST00000521915 107 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 IGKV2-18-201ENST00000522607 343 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC027369.5-201ENST00000533838 755 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC008814.1-201ENST00000603797 406 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 AC011921.3-201ENST00000605540 361 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.31□□□□□ -1.56
CHRNA4P43681 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CHRNA4P43681 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA4P43681 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.3□□□□□ -1.56
CHRNA4P43681 EIF2AP4-201ENST00000424793 1781 ntBASIC5.3□□□□□ -1.56
CHRNA4P43681 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHRNA4P43681 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.3□□□□□ -1.56
CHRNA4P43681 RNU6-858P-201ENST00000362436 107 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms