Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD12P35452 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 AL159169.1-201ENST00000421119 127 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 PSMA6P3-201ENST00000428242 164 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AL590233.1-201ENST00000430017 456 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AL445584.1-201ENST00000431451 330 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD12P35452 MTATP6P13-201ENST00000438531 667 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 PRSS3P4-201ENST00000453323 162 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 RNU7-170P-201ENST00000459303 61 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD12P35452 ST13P14-201ENST00000474095 734 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 ACTR3P3-201ENST00000480448 893 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AP001025.2-201ENST00000490908 477 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC023424.2-201ENST00000493479 777 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD12P35452 RNA5SP468-201ENST00000516782 93 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 MTND4LP26-201ENST00000518144 282 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD12P35452 AC018630.1-201ENST00000541376 925 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC126177.3-201ENST00000551839 688 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC087883.1-201ENST00000551882 391 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC009977.1-201ENST00000586015 570 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AL034351.1-201ENST00000605288 668 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 Z98200.1-201ENST00000607298 470 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AL031666.3-201ENST00000609320 1006 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 U6atac.1-201ENST00000616025 117 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC095031.1-201ENST00000623685 672 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
HOXD12P35452 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD12P35452 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD12P35452 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HOXD12P35452 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD12P35452 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD12P35452 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
HOXD12P35452 AC005832.2-201ENST00000538921 1430 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD12P35452 CCT4P2-201ENST00000233836 1548 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD12P35452 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.12□□□□□ -1.75
HOXD12P35452 RBMY1KP-201ENST00000423480 476 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 BX890604.2-201ENST00000427883 474 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD12P35452 MTND4LP10-201ENST00000435146 291 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 RPL22P17-201ENST00000438729 315 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 PGBD4P3-201ENST00000440731 581 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 MTCO2P3-201ENST00000442543 421 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD12P35452 HMGB1P25-201ENST00000468402 607 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD12P35452 PPIAP15-201ENST00000479662 484 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD12P35452 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD12P35452 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD12P35452 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 RN7SKP289-201ENST00000517244 295 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC090151.1-201ENST00000520784 730 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD12P35452 AC024224.1-201ENST00000538284 609 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD12P35452 MIR3913-1-201ENST00000577744 102 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC090578.1-201ENST00000604955 591 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC010201.1-201ENST00000605051 540 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC109347.2-201ENST00000610220 349 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD12P35452 AL354798.1-201ENST00000622505 329 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 AC008013.2-202ENST00000637965 364 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD12P35452 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXD12P35452 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD12P35452 MTND5P26-201ENST00000426018 1752 ntBASIC4.12□□□□□ -1.75
HOXD12P35452 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HOXD12P35452 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.11□□□□□ -1.75
HOXD12P35452 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD12P35452 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD12P35452 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD12P35452 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
HOXD12P35452 AL161781.1-201ENST00000354277 403 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD12P35452 RN7SKP167-201ENST00000411047 285 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 OR1AA1P-201ENST00000419597 916 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD12P35452 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HOXD12P35452 AL662791.1-201ENST00000441992 928 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.11□□□□□ -1.75
HOXD12P35452 AC099563.1-201ENST00000456086 418 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 HMGN2P16-201ENST00000456802 261 ntBASIC4.11□□□□□ -1.75
HOXD12P35452 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD12P35452 RPS29P19-201ENST00000479709 171 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms