Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC021451.1-201ENST00000523498 1129 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.87□□□□□ -1.95
SHMT2P34897 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC091057.3-201ENST00000602684 733 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC010738.1-201ENST00000604970 987 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC055876.5-201ENST00000605667 259 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC135507.2-201ENST00000612443 309 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AC022306.3-201ENST00000619930 550 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 AL360181.4-201ENST00000621752 134 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 AC103798.2-201ENST00000624292 632 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 AL445984.1-201ENST00000637834 659 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 LINC02211-204ENST00000642024 1070 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
SHMT2P34897 ASNSP3-201ENST00000451989 1306 ntBASIC2.87□□□□□ -1.95
SHMT2P34897 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHMT2P34897 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
SHMT2P34897 AC096644.4-201ENST00000563417 2912 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.86□□□□□ -1.95
SHMT2P34897 CDR1-202ENST00000625883 1485 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHMT2P34897 SNRPEP2-201ENST00000397592 279 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 UBA52P6-201ENST00000399822 382 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AL031121.1-201ENST00000406553 254 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 RNU2-15P-201ENST00000410692 191 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 NANOGP2-201ENST00000435391 727 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AC093392.2-201ENST00000450682 337 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.86□□□□□ -1.95
SHMT2P34897 TRGVB-201ENST00000453257 471 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 snoU13.4-201ENST00000458916 104 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 snoU109.3-201ENST00000459477 145 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 DSTNP2-201ENST00000504533 515 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHMT2P34897 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 SNORA31.26-201ENST00000517250 137 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHMT2P34897 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 OR5G4P-201ENST00000525251 760 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 SLC2A13P1-201ENST00000531560 322 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.86□□□□□ -1.95
SHMT2P34897 AC015688.2-201ENST00000584523 262 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.86□□□□□ -1.95
SHMT2P34897 AL139022.2-201ENST00000606934 443 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AL133445.2-201ENST00000611191 527 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 AC099654.9-201ENST00000637055 678 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 MIR1322-201ENST00000638013 71 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SHMT2P34897 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
SHMT2P34897 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHMT2P34897 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
SHMT2P34897 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHMT2P34897 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHMT2P34897 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SHMT2P34897 RNU6-525P-201ENST00000363685 104 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 RNU6-878P-201ENST00000384578 110 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 SNORA44-201ENST00000384584 132 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AL590004.2-201ENST00000404787 371 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.85□□□□□ -1.95
SHMT2P34897 PSMA6P3-201ENST00000428242 164 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 EZH2P1-201ENST00000431167 291 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AC092427.1-201ENST00000439177 601 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 MTND2P20-201ENST00000440805 661 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 TRIM60P18-201ENST00000441518 828 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 RPL23AP76-201ENST00000441860 458 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.85□□□□□ -1.95
SHMT2P34897 NECAP1P2-201ENST00000455668 727 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 RPL7P23-201ENST00000493874 747 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.85□□□□□ -1.95
SHMT2P34897 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.85□□□□□ -1.95
SHMT2P34897 AC004062.1-201ENST00000509926 645 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 MTCO2P32-201ENST00000514865 403 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 MTATP6P9-201ENST00000515039 680 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 SCGB1D5P-201ENST00000515134 247 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.85□□□□□ -1.95
SHMT2P34897 AC018630.1-201ENST00000541376 925 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AL157394.1-201ENST00000562983 1224 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.85□□□□□ -1.95
SHMT2P34897 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.85□□□□□ -1.95
SHMT2P34897 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.85□□□□□ -1.95
SHMT2P34897 AL451007.1-201ENST00000595491 289 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 AC069304.2-201ENST00000605154 435 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.85□□□□□ -1.95
SHMT2P34897 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms