Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 POU5F1P7-201ENST00000508759 541 ntBASIC4.1□□□□□ -1.75
CIITAP33076 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.1□□□□□ -1.75
CIITAP33076 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.1□□□□□ -1.75
CIITAP33076 AC008489.1-201ENST00000524271 483 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
CIITAP33076 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 AC009063.1-201ENST00000563342 702 ntBASIC4.1□□□□□ -1.75
CIITAP33076 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC112187.2-201ENST00000604345 283 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC098614.4-201ENST00000607601 462 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC006566.1-201ENST00000608943 513 ntBASIC4.1□□□□□ -1.75
CIITAP33076 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.1□□□□□ -1.75
CIITAP33076 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.1□□□□□ -1.75
CIITAP33076 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 AL732372.2-225ENST00000642124 456 ntBASIC4.1□□□□□ -1.75
CIITAP33076 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
CIITAP33076 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.75
CIITAP33076 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CIITAP33076 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CIITAP33076 RNU1-18P-201ENST00000363062 164 ntBASIC4.09□□□□□ -1.75
CIITAP33076 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
CIITAP33076 RNU6-769P-201ENST00000384407 104 ntBASIC4.09□□□□□ -1.75
CIITAP33076 RNU1-89P-201ENST00000384592 164 ntBASIC4.09□□□□□ -1.75
CIITAP33076 MIR200C-201ENST00000384980 68 ntBASIC4.09□□□□□ -1.75
CIITAP33076 MIR449B-201ENST00000384995 97 ntBASIC4.09□□□□□ -1.75
CIITAP33076 U8.14-201ENST00000390843 143 ntBASIC4.09□□□□□ -1.75
CIITAP33076 RAD23BP2-201ENST00000416003 1207 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.09□□□□□ -1.75
CIITAP33076 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.09□□□□□ -1.75
CIITAP33076 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.09□□□□□ -1.75
CIITAP33076 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.09□□□□□ -1.75
CIITAP33076 AC109583.1-201ENST00000432156 268 ntBASIC4.09□□□□□ -1.75
CIITAP33076 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CIITAP33076 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 ARPC3P5-201ENST00000448802 534 ntBASIC4.09□□□□□ -1.75
CIITAP33076 HMGB1P36-201ENST00000487709 576 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC078918.1-201ENST00000498515 228 ntBASIC4.09□□□□□ -1.75
CIITAP33076 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.09□□□□□ -1.75
CIITAP33076 MTND5P4-201ENST00000514978 288 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AP003392.2-201ENST00000527269 208 ntBASIC4.09□□□□□ -1.75
CIITAP33076 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CIITAP33076 AP004242.1-201ENST00000533701 349 ntBASIC4.09□□□□□ -1.75
CIITAP33076 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.09□□□□□ -1.75
CIITAP33076 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.09□□□□□ -1.75
CIITAP33076 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.09□□□□□ -1.75
CIITAP33076 AC245505.1-201ENST00000556398 224 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC107954.1-201ENST00000565906 727 ntBASIC4.09□□□□□ -1.75
CIITAP33076 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 BNIP3P23-201ENST00000599655 511 ntBASIC4.09□□□□□ -1.75
CIITAP33076 SEPT7P9-203ENST00000604116 343 ntBASIC4.09□□□□□ -1.75
CIITAP33076 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 AC108747.1-201ENST00000609508 535 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.09□□□□□ -1.75
CIITAP33076 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
CIITAP33076 AC093591.3-201ENST00000634516 308 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC068137.3-201ENST00000639191 341 ntBASIC4.09□□□□□ -1.75
CIITAP33076 AC073869.6-201ENST00000640656 341 ntBASIC4.09□□□□□ -1.75
CIITAP33076 MFSD8-236ENST00000641509 4050 ntBASIC4.09□□□□□ -1.75
CIITAP33076 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CIITAP33076 AC027514.1-201ENST00000588561 1603 ntBASIC4.09□□□□□ -1.76
CIITAP33076 EXOC5P1-201ENST00000510543 1969 ntBASIC4.09□□□□□ -1.76
CIITAP33076 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CIITAP33076 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.76
CIITAP33076 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
CIITAP33076 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIITAP33076 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 RPL23AP57-201ENST00000332361 466 ntBASIC4.08□□□□□ -1.76
CIITAP33076 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIITAP33076 RNU5F-7P-201ENST00000363696 115 ntBASIC4.08□□□□□ -1.76
CIITAP33076 RNA5SP189-201ENST00000364920 115 ntBASIC4.08□□□□□ -1.76
CIITAP33076 AL359837.1-201ENST00000381357 287 ntBASIC4.08□□□□□ -1.76
CIITAP33076 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 HMGN1P14-201ENST00000412459 517 ntBASIC4.08□□□□□ -1.76
CIITAP33076 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 DNAJC19P4-201ENST00000440115 345 ntBASIC4.08□□□□□ -1.76
CIITAP33076 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CIITAP33076 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.08□□□□□ -1.76
CIITAP33076 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.08□□□□□ -1.76
CIITAP33076 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.08□□□□□ -1.76
CIITAP33076 AC005921.1-201ENST00000510589 286 ntBASIC4.08□□□□□ -1.76
CIITAP33076 AF131216.2-201ENST00000512316 564 ntBASIC4.08□□□□□ -1.76
CIITAP33076 RN7SKP13-201ENST00000515933 244 ntBASIC4.08□□□□□ -1.76
CIITAP33076 RNA5SP309-201ENST00000516670 106 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms