Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RN7SKP116-201ENST00000516902 319 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 AP000790.1-201ENST00000528891 737 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
HOXA11P31270 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA11P31270 AC087883.1-201ENST00000551882 391 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA11P31270 AP005205.1-201ENST00000563503 508 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 AC068135.2-201ENST00000569293 1028 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXA11P31270 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA11P31270 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA11P31270 MIR7975-201ENST00000619350 68 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA11P31270 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA11P31270 AL031985.3-201ENST00000565390 2449 ntBASIC3.95□□□□□ -1.78
HOXA11P31270 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA11P31270 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA11P31270 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXA11P31270 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA11P31270 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA11P31270 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA11P31270 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HOXA11P31270 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RNY4P24-201ENST00000362735 96 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RNU6-867P-201ENST00000364956 107 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RNU6-297P-201ENST00000384636 107 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 MIR181A1-201ENST00000385026 110 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RNU6-837P-201ENST00000391056 108 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 MTHFD2P2-201ENST00000407725 247 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 MIR548F1-201ENST00000408667 84 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 HMGN1P14-201ENST00000412459 517 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA11P31270 SDCBPP2-201ENST00000424643 885 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC096632.1-201ENST00000427395 310 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC010881.1-201ENST00000433830 235 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC073063.1-201ENST00000434352 607 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RPL7P36-201ENST00000444633 681 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA11P31270 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA11P31270 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA11P31270 PRSS3P4-201ENST00000453323 162 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA11P31270 LARP1BP2-201ENST00000486594 519 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC104057.1-201ENST00000515547 497 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC103843.2-201ENST00000530523 682 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC068587.4-201ENST00000533893 186 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA11P31270 AC107954.1-201ENST00000565906 727 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 MIR548AB-201ENST00000584917 84 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AP001521.1-201ENST00000609150 300 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AL356321.1-201ENST00000621360 228 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 AL732618.1-201ENST00000623251 301 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA11P31270 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
HOXA11P31270 MTCO1P12-201ENST00000414273 1543 ntBASIC3.94□□□□□ -1.78
HOXA11P31270 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA11P31270 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA11P31270 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA11P31270 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA11P31270 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA11P31270 RNU6-1181P-201ENST00000384191 106 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 HMGB1P17-201ENST00000403495 628 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RAP1BP3-201ENST00000407180 549 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 HMGB3P20-201ENST00000417997 600 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RPL30P16-201ENST00000419341 429 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA11P31270 ZYG11AP1-201ENST00000430329 837 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA11P31270 ATP5JP1-201ENST00000431631 322 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXA11P31270 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA11P31270 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXA11P31270 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXA11P31270 NANOGNBP1-201ENST00000448444 480 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 PAXBP1P1-201ENST00000449315 447 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RPS15AP1-201ENST00000457423 391 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RPS4XP13-201ENST00000483219 789 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AC069499.1-201ENST00000489433 509 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AC021678.1-201ENST00000505195 936 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AC093809.1-201ENST00000509155 340 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 RN7SKP209-201ENST00000516888 304 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 IGKV2D-23-201ENST00000518179 286 ntBASIC3.93□□□□□ -1.78
HOXA11P31270 AC025881.1-201ENST00000518851 512 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms