Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.16□□□□□ -1.9
SHC1P29353 CYCSP2-201ENST00000558168 301 ntBASIC3.16□□□□□ -1.9
SHC1P29353 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.16□□□□□ -1.9
SHC1P29353 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.16□□□□□ -1.9
SHC1P29353 MIR4444-1-201ENST00000581696 74 ntBASIC3.16□□□□□ -1.9
SHC1P29353 MIR4444-2-201ENST00000584390 74 ntBASIC3.16□□□□□ -1.9
SHC1P29353 MIR548AB-201ENST00000584917 84 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.16□□□□□ -1.9
SHC1P29353 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
SHC1P29353 AC090186.1-201ENST00000605991 572 ntBASIC3.16□□□□□ -1.9
SHC1P29353 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 AL357080.1-201ENST00000617394 239 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AC018755.4-201ENST00000619715 454 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AP003355.3-201ENST00000623465 114 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AC231657.1-201ENST00000624313 397 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AL359740.1-201ENST00000624340 592 ntBASIC3.16□□□□□ -1.9
SHC1P29353 AC025048.6-202ENST00000627667 438 ntBASIC3.16□□□□□ -1.9
SHC1P29353 MIR7153-201ENST00000637758 57 ntBASIC3.16□□□□□ -1.9
SHC1P29353 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
SHC1P29353 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.16□□□□□ -1.9
SHC1P29353 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHC1P29353 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHC1P29353 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHC1P29353 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SHC1P29353 MTND4P16-201ENST00000466108 1367 ntBASIC3.15□□□□□ -1.9
SHC1P29353 MTCO1P23-201ENST00000415223 1526 ntBASIC3.15□□□□□ -1.9
SHC1P29353 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.15□□□□□ -1.9
SHC1P29353 RNU4-35P-201ENST00000362588 141 ntBASIC3.15□□□□□ -1.91
SHC1P29353 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
SHC1P29353 UBE2V1P10-201ENST00000414685 269 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AIMP1P1-201ENST00000418670 937 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AC008280.1-201ENST00000418851 412 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AL389915.1-201ENST00000422463 466 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AL512649.1-201ENST00000428997 581 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 UBE2FP3-201ENST00000436366 524 ntBASIC3.15□□□□□ -1.91
SHC1P29353 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.15□□□□□ -1.91
SHC1P29353 AL590399.6-201ENST00000446396 307 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AL592447.1-201ENST00000447592 540 ntBASIC3.15□□□□□ -1.91
SHC1P29353 RPS20P32-201ENST00000456044 356 ntBASIC3.15□□□□□ -1.91
SHC1P29353 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 RNU2-27P-201ENST00000516185 142 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AC239860.2-201ENST00000525886 270 ntBASIC3.15□□□□□ -1.91
SHC1P29353 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
SHC1P29353 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.15□□□□□ -1.91
SHC1P29353 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
SHC1P29353 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.15□□□□□ -1.91
SHC1P29353 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.15□□□□□ -1.91
SHC1P29353 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHC1P29353 HSPE1P14-201ENST00000605812 302 ntBASIC3.15□□□□□ -1.91
SHC1P29353 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHC1P29353 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHC1P29353 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SHC1P29353 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
SHC1P29353 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.14□□□□□ -1.91
SHC1P29353 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 AC005832.2-201ENST00000538921 1430 ntBASIC3.14□□□□□ -1.91
SHC1P29353 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SHC1P29353 RNU1-75P-201ENST00000347264 129 ntBASIC3.14□□□□□ -1.91
SHC1P29353 RNU6-501P-201ENST00000364072 100 ntBASIC3.14□□□□□ -1.91
SHC1P29353 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SHC1P29353 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHC1P29353 RNU6-517P-201ENST00000384362 110 ntBASIC3.14□□□□□ -1.91
SHC1P29353 RNU6-1215P-201ENST00000384441 102 ntBASIC3.14□□□□□ -1.91
SHC1P29353 Y_RNA.516-201ENST00000384541 124 ntBASIC3.14□□□□□ -1.91
SHC1P29353 MIR218-2-201ENST00000385006 110 ntBASIC3.14□□□□□ -1.91
SHC1P29353 SNORD17-201ENST00000390930 237 ntBASIC3.14□□□□□ -1.91
SHC1P29353 RNA5SP171-201ENST00000391071 115 ntBASIC3.14□□□□□ -1.91
SHC1P29353 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.14□□□□□ -1.91
SHC1P29353 MTCYBP36-201ENST00000404146 440 ntBASIC3.14□□□□□ -1.91
SHC1P29353 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.14□□□□□ -1.91
SHC1P29353 RNU2-28P-201ENST00000410457 189 ntBASIC3.14□□□□□ -1.91
SHC1P29353 AC073264.1-201ENST00000411508 416 ntBASIC3.14□□□□□ -1.91
SHC1P29353 AC007899.1-201ENST00000412776 775 ntBASIC3.14□□□□□ -1.91
SHC1P29353 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.14□□□□□ -1.91
SHC1P29353 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.14□□□□□ -1.91
SHC1P29353 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.14□□□□□ -1.91
SHC1P29353 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.14□□□□□ -1.91
SHC1P29353 ZYG11AP1-201ENST00000430329 837 ntBASIC3.14□□□□□ -1.91
SHC1P29353 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.14□□□□□ -1.91
SHC1P29353 CYCSP43-201ENST00000438233 310 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms