Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AP001486.2-201ENST00000561652 5113 ntBASIC4.06□□□□□ -1.76
PF4V1P10720 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PF4V1P10720 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PF4V1P10720 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 AF127577.6-201ENST00000623352 2191 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 SNURFL-201ENST00000309296 343 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RNU6-552P-201ENST00000362869 119 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 U3.3-201ENST00000362986 216 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 SNORA48.4-201ENST00000391089 134 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AL354719.1-201ENST00000406535 843 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 OR6C66P-201ENST00000414917 930 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC092809.3-201ENST00000415453 231 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC068533.1-201ENST00000418542 415 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 DDX39BP1-205ENST00000422507 192 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 MTCYBP8-201ENST00000422855 651 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RPL7P46-201ENST00000425129 740 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 USP9YP9-201ENST00000429406 715 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.05□□□□□ -1.76
PF4V1P10720 PIGFP3-201ENST00000441918 722 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 KNOP1P3-201ENST00000446933 426 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 ELOCP23-201ENST00000452014 332 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 HMGN2P7-201ENST00000456186 273 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RPL21P8-201ENST00000465083 535 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RPL31P58-201ENST00000469001 379 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 SNRPGP3-201ENST00000469405 227 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC022795.1-201ENST00000473808 480 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 TRBV1-201ENST00000476502 284 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 RBBP4P6-201ENST00000508098 202 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.05□□□□□ -1.76
PF4V1P10720 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 RNU6-1282P-201ENST00000516735 96 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 SNORD60.2-201ENST00000516883 86 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 RNA5SP471-201ENST00000516971 106 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.05□□□□□ -1.76
PF4V1P10720 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 AL121576.1-201ENST00000556055 276 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.05□□□□□ -1.76
PF4V1P10720 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.05□□□□□ -1.76
PF4V1P10720 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 BNIP3P9-201ENST00000603714 553 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AP000907.4-201ENST00000604143 237 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 AC093799.2-201ENST00000610062 578 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 DISC2.1-201ENST00000612827 205 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PF4V1P10720 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.05□□□□□ -1.76
PF4V1P10720 TPTE2P4-201ENST00000258589 1605 ntBASIC4.05□□□□□ -1.76
PF4V1P10720 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
PF4V1P10720 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PF4V1P10720 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
PF4V1P10720 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PF4V1P10720 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PF4V1P10720 Y_RNA.38-201ENST00000362617 102 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 RN7SKP113-201ENST00000363891 295 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 Y_RNA.245-201ENST00000364493 95 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 RNU6-903P-201ENST00000391270 109 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 AL136116.1-201ENST00000403591 381 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 AL121834.1-202ENST00000404494 277 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.04□□□□□ -1.76
PF4V1P10720 RPL30P2-201ENST00000414021 291 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.04□□□□□ -1.76
PF4V1P10720 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.04□□□□□ -1.76
PF4V1P10720 NRBF2P3-201ENST00000432731 865 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 HSPD1P21-201ENST00000436541 245 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 AC122718.1-201ENST00000439448 744 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 Z80107.2-201ENST00000445127 392 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.04□□□□□ -1.76
PF4V1P10720 AL118520.1-201ENST00000450770 291 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.04□□□□□ -1.76
PF4V1P10720 RN7SL443P-201ENST00000464331 290 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 FAM133DP-201ENST00000464802 691 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 KC877373.1-201ENST00000479066 408 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PF4V1P10720 RNA5SP401-201ENST00000515920 127 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 RNU6-143P-201ENST00000516942 93 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 RNA5SP230-201ENST00000517039 122 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 RNA5SP290-201ENST00000517133 127 ntBASIC4.04□□□□□ -1.76
PF4V1P10720 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
PF4V1P10720 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.04□□□□□ -1.76
PF4V1P10720 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.04□□□□□ -1.76
PF4V1P10720 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms