Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC021171.1-201ENST00000603137 706 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL133393.1-201ENST00000603277 287 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL137843.1-201ENST00000605078 385 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AL033523.1-201ENST00000605153 153 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AC007349.4-201ENST00000608114 532 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AC006386.2-201ENST00000624491 75 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AC012005.1-201ENST00000624575 75 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC4P09017 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC4P09017 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC4P09017 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC4P09017 LINC02211-204ENST00000642024 1070 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC4P09017 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC4P09017 AC004925.1-201ENST00000624256 2706 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.95
HOXC4P09017 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 AC002546.1-201ENST00000588041 2504 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 RNU6-263P-201ENST00000363811 107 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HOXC4P09017 RPL7P8-201ENST00000411964 730 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 AL645937.1-202ENST00000421799 937 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 RPP40P1-201ENST00000426762 456 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC093156.1-201ENST00000440382 670 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.89□□□□□ -1.95
HOXC4P09017 Z83846.1-201ENST00000446798 265 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 AC096576.1-201ENST00000489014 359 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC010486.2-201ENST00000505572 483 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC117522.2-201ENST00000510049 657 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 SNORA31.20-201ENST00000517111 133 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC4P09017 MTCO3P15-201ENST00000526563 574 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC007834.2-201ENST00000536310 343 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 MTCYBP27-201ENST00000555160 670 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 MIR4474-201ENST00000579189 78 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 BPTFP1-201ENST00000579209 492 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC040904.1-201ENST00000590850 223 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 VN1R83P-201ENST00000595685 445 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 AL020997.3-201ENST00000602843 359 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC4P09017 AL583856.2-201ENST00000606298 543 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 VN1R7P-201ENST00000619242 903 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 AL590240.3-201ENST00000621416 943 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 SCARNA15.3-201ENST00000626315 122 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 SCARNA4.1-201ENST00000628597 123 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC4P09017 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC4P09017 AL136164.4-201ENST00000625013 2135 ntBASIC2.89□□□□□ -1.95
HOXC4P09017 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC4P09017 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC4P09017 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HOXC4P09017 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HOXC4P09017 RNU6-50P-201ENST00000362356 103 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 Y_RNA.169-201ENST00000363745 96 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNU4-92P-201ENST00000363783 136 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 U8.9-201ENST00000365667 134 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNU6-921P-201ENST00000384361 107 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNU6-83P-201ENST00000384568 112 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 MIR649-201ENST00000384843 97 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.88□□□□□ -1.95
HOXC4P09017 AC119751.3-201ENST00000399720 670 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 AL122016.1-201ENST00000403365 367 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNA5SP129-201ENST00000410276 118 ntBASIC2.88□□□□□ -1.95
HOXC4P09017 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms