Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOBP04114 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.08□□□□□ -2.24
APOBP04114 AL357520.1-201ENST00000441557 453 ntBASIC1.08□□□□□ -2.24
APOBP04114 RSL24D1P2-201ENST00000445584 366 ntBASIC1.08□□□□□ -2.24
APOBP04114 AC103810.1-201ENST00000579873 453 ntBASIC1.08□□□□□ -2.24
APOBP04114 AP002967.1-201ENST00000624203 539 ntBASIC1.08□□□□□ -2.24
APOBP04114 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.07□□□□□ -2.24
APOBP04114 MTND2P29-201ENST00000438595 412 ntBASIC1.07□□□□□ -2.24
APOBP04114 ATG10-AS1-201ENST00000504846 648 ntBASIC1.07□□□□□ -2.24
APOBP04114 AP000907.2-201ENST00000530827 353 ntBASIC1.07□□□□□ -2.24
APOBP04114 AC016957.1-201ENST00000534895 309 ntBASIC1.07□□□□□ -2.24
APOBP04114 AC135279.1-201ENST00000543493 504 ntBASIC1.07□□□□□ -2.24
APOBP04114 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.07□□□□□ -2.24
APOBP04114 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.07□□□□□ -2.24
APOBP04114 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
APOBP04114 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
APOBP04114 U8.9-201ENST00000365667 134 ntBASIC1.07□□□□□ -2.24
APOBP04114 AL121972.1-201ENST00000402023 252 ntBASIC1.07□□□□□ -2.24
APOBP04114 HMGB3P2-201ENST00000411913 584 ntBASIC1.07□□□□□ -2.24
APOBP04114 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 AL138787.1-202ENST00000437804 898 ntBASIC1.07□□□□□ -2.24
APOBP04114 OR7L1P-201ENST00000456181 380 ntBASIC1.07□□□□□ -2.24
APOBP04114 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.07□□□□□ -2.24
APOBP04114 AC234775.3-201ENST00000564612 656 ntBASIC1.07□□□□□ -2.24
APOBP04114 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
APOBP04114 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 AL513331.1-201ENST00000411908 397 ntBASIC1.07□□□□□ -2.24
APOBP04114 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
APOBP04114 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.07□□□□□ -2.24
APOBP04114 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.07□□□□□ -2.24
APOBP04114 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
APOBP04114 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
APOBP04114 AL450326.2-201ENST00000421913 1962 ntBASIC1.07□□□□□ -2.24
APOBP04114 Y_RNA.205-201ENST00000364128 113 ntBASIC1.06□□□□□ -2.24
APOBP04114 RNU6-1027P-201ENST00000383998 107 ntBASIC1.06□□□□□ -2.24
APOBP04114 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.06□□□□□ -2.24
APOBP04114 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.06□□□□□ -2.24
APOBP04114 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOBP04114 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOBP04114 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOBP04114 AC104435.1-201ENST00000483483 166 ntBASIC1.06□□□□□ -2.24
APOBP04114 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
APOBP04114 U73479.1-201ENST00000618062 168 ntBASIC1.06□□□□□ -2.24
APOBP04114 METTL21EP-201ENST00000298105 713 ntBASIC1.06□□□□□ -2.24
APOBP04114 AC019155.1-201ENST00000382242 574 ntBASIC1.06□□□□□ -2.24
APOBP04114 SNORA79B-201ENST00000410557 148 ntBASIC1.06□□□□□ -2.24
APOBP04114 UBE2V1P5-201ENST00000440070 405 ntBASIC1.06□□□□□ -2.24
APOBP04114 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.06□□□□□ -2.24
APOBP04114 AC009961.3-201ENST00000449832 765 ntBASIC1.06□□□□□ -2.24
APOBP04114 AC090255.1-201ENST00000495779 349 ntBASIC1.06□□□□□ -2.24
APOBP04114 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.06□□□□□ -2.24
APOBP04114 TBCAP3-201ENST00000512475 312 ntBASIC1.06□□□□□ -2.24
APOBP04114 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.06□□□□□ -2.24
APOBP04114 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
APOBP04114 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
APOBP04114 RNA5SP27-201ENST00000363839 119 ntBASIC1.06□□□□□ -2.24
APOBP04114 RPL17P12-201ENST00000413391 526 ntBASIC1.06□□□□□ -2.24
APOBP04114 TOMM22P1-201ENST00000418578 312 ntBASIC1.06□□□□□ -2.24
APOBP04114 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.06□□□□□ -2.24
APOBP04114 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
APOBP04114 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
APOBP04114 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
APOBP04114 XKRYP4-201ENST00000414395 483 ntBASIC1.05□□□□□ -2.24
APOBP04114 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 XKRYP5-201ENST00000449659 483 ntBASIC1.05□□□□□ -2.24
APOBP04114 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 AL035411.2-201ENST00000604022 421 ntBASIC1.05□□□□□ -2.24
APOBP04114 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 ERHP2-201ENST00000402323 299 ntBASIC1.05□□□□□ -2.24
APOBP04114 PTGES3P5-201ENST00000455109 434 ntBASIC1.05□□□□□ -2.24
APOBP04114 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.05□□□□□ -2.24
APOBP04114 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 AP001005.3-201ENST00000622049 129 ntBASIC1.05□□□□□ -2.24
APOBP04114 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
APOBP04114 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
APOBP04114 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 XKRY2-201ENST00000442362 1093 ntBASIC1.05□□□□□ -2.24
APOBP04114 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 AC104581.2-201ENST00000572227 430 ntBASIC1.05□□□□□ -2.24
APOBP04114 AC103987.3-201ENST00000582071 292 ntBASIC1.05□□□□□ -2.24
APOBP04114 AC010329.2-201ENST00000595195 2737 ntBASIC1.05□□□□□ -2.24
APOBP04114 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
APOBP04114 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
APOBP04114 SNORA62.2-201ENST00000364672 152 ntBASIC1.05□□□□□ -2.24
APOBP04114 HMGB1P13-201ENST00000406019 642 ntBASIC1.05□□□□□ -2.24
APOBP04114 snoU109.4-201ENST00000458953 143 ntBASIC1.05□□□□□ -2.24
APOBP04114 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
APOBP04114 RN7SL274P-201ENST00000492268 272 ntBASIC1.05□□□□□ -2.24
APOBP04114 RPL23AP55-201ENST00000498163 452 ntBASIC1.05□□□□□ -2.24
APOBP04114 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.05□□□□□ -2.24
APOBP04114 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms