Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC122108.2-201ENST00000611946 526 ntBASIC3.41□□□□□ -1.86
CLPTM1O96005 AC010678.1-201ENST00000614118 713 ntBASIC3.41□□□□□ -1.86
CLPTM1O96005 AC090116.1-201ENST00000615679 446 ntBASIC3.41□□□□□ -1.86
CLPTM1O96005 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CLPTM1O96005 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.41□□□□□ -1.86
CLPTM1O96005 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.41□□□□□ -1.86
CLPTM1O96005 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
CLPTM1O96005 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.41□□□□□ -1.86
CLPTM1O96005 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLPTM1O96005 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLPTM1O96005 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLPTM1O96005 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLPTM1O96005 SAGE4P-201ENST00000442271 3381 ntBASIC3.41□□□□□ -1.86
CLPTM1O96005 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLPTM1O96005 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLPTM1O96005 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLPTM1O96005 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLPTM1O96005 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.4□□□□□ -1.86
CLPTM1O96005 Y_RNA.359-201ENST00000365498 102 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLPTM1O96005 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 MIR320C1-201ENST00000408566 88 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 FNDC3CP-201ENST00000420795 1155 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 RPS27AP14-201ENST00000422868 454 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.87
CLPTM1O96005 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 RPL7P2-201ENST00000427639 268 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLPTM1O96005 MTND1P28-201ENST00000435623 950 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 RPL23AP74-201ENST00000437246 471 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC127537.2-201ENST00000439258 465 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 RPS29P7-201ENST00000439662 171 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 USP9YP29-201ENST00000445112 563 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 RPL7P52-201ENST00000449200 742 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 PAXBP1P1-201ENST00000449315 447 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC006480.1-201ENST00000449887 378 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 RPL21P11-201ENST00000461458 483 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AL672167.3-201ENST00000465951 960 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 RPL31P50-201ENST00000471002 296 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AP000797.1-201ENST00000478870 387 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 VN1R105P-201ENST00000486595 910 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 CBX3P3-201ENST00000508108 532 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AC025881.1-201ENST00000518851 512 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLPTM1O96005 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 COX6CP8-201ENST00000522620 226 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC022861.1-201ENST00000522981 663 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 HSPA8P13-201ENST00000523715 472 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AP004247.1-201ENST00000531556 1289 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CLPTM1O96005 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLPTM1O96005 AC091489.2-201ENST00000566263 604 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CLPTM1O96005 MIR544B-201ENST00000582372 78 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.4□□□□□ -1.87
CLPTM1O96005 AL020997.2-201ENST00000602607 184 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC007566.2-201ENST00000603642 413 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AL513477.2-201ENST00000607858 568 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC110774.1-201ENST00000623567 2018 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
CLPTM1O96005 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLPTM1O96005 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLPTM1O96005 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLPTM1O96005 AC068647.1-201ENST00000489539 2265 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
CLPTM1O96005 FGF7P2-201ENST00000332473 296 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 Y_RNA.126-201ENST00000363382 111 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AL583834.1-201ENST00000406943 343 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.39□□□□□ -1.87
CLPTM1O96005 HMGB3P23-201ENST00000414981 585 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.39□□□□□ -1.87
CLPTM1O96005 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.39□□□□□ -1.87
CLPTM1O96005 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.39□□□□□ -1.87
CLPTM1O96005 MRPS18BP2-201ENST00000434310 759 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.39□□□□□ -1.87
CLPTM1O96005 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.39□□□□□ -1.87
CLPTM1O96005 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.39□□□□□ -1.87
CLPTM1O96005 RSU1P2-202ENST00000437884 485 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.39□□□□□ -1.87
CLPTM1O96005 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.39□□□□□ -1.87
CLPTM1O96005 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.39□□□□□ -1.87
CLPTM1O96005 ST13P20-201ENST00000447996 1065 ntBASIC3.39□□□□□ -1.87
CLPTM1O96005 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms