Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.49□□□□□ -1.69
CNOT4O95628 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
CNOT4O95628 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNOT4O95628 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.49□□□□□ -1.69
CNOT4O95628 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNOT4O95628 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.49□□□□□ -1.69
CNOT4O95628 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.49□□□□□ -1.69
CNOT4O95628 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.48□□□□□ -1.69
CNOT4O95628 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CNOT4O95628 RNU6-522P-201ENST00000364497 107 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 Y_RNA.301-201ENST00000364990 103 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 Y_RNA.373-201ENST00000365600 103 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 SNORA2.3-201ENST00000383920 135 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AL606923.1-201ENST00000406616 190 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 RNA5SP345-201ENST00000410646 108 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 CHIAP3-201ENST00000423668 1133 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 RPL21P112-201ENST00000434403 463 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.48□□□□□ -1.69
CNOT4O95628 RPL7P52-201ENST00000449200 742 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC091180.1-201ENST00000462104 372 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC021382.1-201ENST00000483523 359 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC024224.1-201ENST00000538284 609 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.48□□□□□ -1.69
CNOT4O95628 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 NDUFB4P11-201ENST00000560510 395 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC022884.2-201ENST00000578535 580 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC124303.1-201ENST00000605703 360 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AC010424.2-201ENST00000607594 443 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.48□□□□□ -1.69
CNOT4O95628 AL132822.1-201ENST00000617063 513 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 AL596245.1-201ENST00000618994 362 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CNOT4O95628 TLK1P1-201ENST00000456760 2440 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.48□□□□□ -1.69
CNOT4O95628 AC009902.3-201ENST00000606235 2172 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CNOT4O95628 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 ADAM5-202ENST00000399789 1942 ntBASIC4.48□□□□□ -1.69
CNOT4O95628 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNOT4O95628 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CNOT4O95628 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CNOT4O95628 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNOT4O95628 DHX40P1-201ENST00000588725 1412 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.47□□□□□ -1.69
CNOT4O95628 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNOT4O95628 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNOT4O95628 RNU6-989P-201ENST00000362756 107 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RNU6-552P-201ENST00000362869 119 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RNU5A-8P-201ENST00000364102 114 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RNA5SP189-201ENST00000364920 115 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 Y_RNA.395-201ENST00000383945 109 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RNU6-1013P-201ENST00000384180 107 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 Y_RNA.530-201ENST00000384587 101 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 MIR192-201ENST00000384915 110 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 MIR558-201ENST00000384920 94 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CNOT4O95628 RPS4XP9-201ENST00000405151 780 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 COX6B1P1-201ENST00000415962 213 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AC244098.2-201ENST00000422068 99 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.47□□□□□ -1.69
CNOT4O95628 RPS3AP52-201ENST00000435639 297 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 UBE2V1P13-201ENST00000436983 439 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RPS29P9-201ENST00000440360 171 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 RPS29P15-201ENST00000458329 171 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AC245028.2-201ENST00000458673 253 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RNU7-152P-201ENST00000458982 64 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AP001992.1-205ENST00000462248 379 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CNOT4O95628 RPL7L1P8-201ENST00000469911 741 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 RN7SL481P-201ENST00000477764 299 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.47□□□□□ -1.69
CNOT4O95628 FTH1P21-201ENST00000512179 511 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.47□□□□□ -1.69
CNOT4O95628 RAB9BP1-201ENST00000519581 626 ntBASIC4.47□□□□□ -1.69
CNOT4O95628 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms