Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORD84-203ENST00000584275 78 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.79□□□□□ -1.96
CTDNEP1O95476 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AL606834.3-201ENST00000602615 496 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 NRBF2P5-201ENST00000603087 788 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AP002802.2-201ENST00000605877 235 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AC103810.6-201ENST00000606708 136 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AC024933.1-201ENST00000608472 348 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 VN1R7P-201ENST00000619242 903 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AP003485.2-201ENST00000623636 610 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 AL109659.3-201ENST00000624985 950 ntBASIC2.79□□□□□ -1.96
CTDNEP1O95476 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTDNEP1O95476 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC046144.1-201ENST00000478559 1853 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTDNEP1O95476 MIR525-201ENST00000384978 85 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 RNU6-298P-201ENST00000390888 96 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 RNU4-65P-201ENST00000410473 140 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 RNU6-1077P-201ENST00000410506 102 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC073264.1-201ENST00000411508 416 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AL354692.1-201ENST00000423044 315 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 RPS6P14-201ENST00000425165 719 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 RPS26P56-201ENST00000444468 240 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC233982.1-201ENST00000451247 436 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC244505.3-201ENST00000454598 187 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 NAP1L1P3-201ENST00000462291 880 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 RNU6-202P-201ENST00000515998 96 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 SNORA19.3-201ENST00000516165 130 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 RPL7P20-201ENST00000520308 745 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC078814.3-201ENST00000553036 491 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 EIF5A2P1-201ENST00000564027 460 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 BNIP3P27-201ENST00000599991 412 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AP004247.3-201ENST00000608682 624 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC046143.2-201ENST00000609789 160 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AL391834.2-201ENST00000609982 546 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC022306.3-201ENST00000619930 550 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 MIR1291-201ENST00000627649 87 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
CTDNEP1O95476 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTDNEP1O95476 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
CTDNEP1O95476 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTDNEP1O95476 AP002907.1-201ENST00000606361 1430 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC111188.2-201ENST00000529697 1387 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 MTND4P9-201ENST00000507819 1346 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 RNVU1-3-201ENST00000364313 161 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 RNU6-619P-201ENST00000365146 108 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 MIR620-201ENST00000385232 95 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 RNU6-272P-201ENST00000411028 104 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 ATG3P1-201ENST00000419507 911 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 USP9YP21-201ENST00000420603 432 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC009237.2-201ENST00000421358 284 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC234064.1-201ENST00000436312 247 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC018634.1-201ENST00000437554 401 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 HMGB1P15-201ENST00000453854 435 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC126389.1-201ENST00000477436 290 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 RNF138P1-201ENST00000502765 546 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC008427.1-201ENST00000503102 655 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.77□□□□□ -1.97
CTDNEP1O95476 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.77□□□□□ -1.97
CTDNEP1O95476 YWHAZP1-201ENST00000556286 722 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 VN1R87P-201ENST00000596706 487 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC007621.1-201ENST00000604544 437 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 VIS1.1-201ENST00000610517 203 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC231759.1-201ENST00000616455 597 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AC084824.4-201ENST00000620106 731 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AP003476.1-201ENST00000623984 516 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 AL160394.1-201ENST00000624765 724 ntBASIC2.77□□□□□ -1.97
CTDNEP1O95476 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
CTDNEP1O95476 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CTDNEP1O95476 AL049780.3-201ENST00000624612 1583 ntBASIC2.76□□□□□ -1.97
CTDNEP1O95476 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTDNEP1O95476 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTDNEP1O95476 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CTDNEP1O95476 RNU6-1151P-201ENST00000384684 107 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms