Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 USP9YP27-201ENST00000418455 438 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 FCF1P1-201ENST00000432690 571 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 HSFY6P-201ENST00000445573 403 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 ARPC3P5-201ENST00000448802 534 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AL162151.2-201ENST00000448875 158 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 C1DP4-201ENST00000455429 424 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 SNRPGP5-201ENST00000456003 220 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AC026410.2-201ENST00000460281 156 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AC087312.1-201ENST00000471411 480 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL5O76039 AC023598.1-201ENST00000472521 361 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC024589.1-201ENST00000512207 263 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 MIR2116-201ENST00000517221 80 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 SOD1P3-201ENST00000518682 454 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC090877.1-201ENST00000561418 344 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AC120057.2-201ENST00000571520 271 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 MIR5186-201ENST00000577504 120 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL5O76039 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC244505.7-201ENST00000599675 272 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 CKS1BP3-201ENST00000600888 237 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL5O76039 AC091905.1-201ENST00000624400 311 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL5O76039 U6.101-201ENST00000637707 76 ntBASIC4.52□□□□□ -1.69
CDKL5O76039 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL5O76039 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL5O76039 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDKL5O76039 AC107081.3-201ENST00000612715 2034 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 EXOC5P1-201ENST00000510543 1969 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDKL5O76039 SPRR2C-201ENST00000290702 219 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDKL5O76039 Y_RNA.573-201ENST00000384763 105 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RNU6-603P-201ENST00000411403 107 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 PIGFP2-201ENST00000421400 651 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 RPL31P35-201ENST00000431058 377 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC002486.1-201ENST00000435098 391 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RPL17P49-201ENST00000443728 411 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RPL31P50-201ENST00000471002 296 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDKL5O76039 MTCO1P35-201ENST00000515270 228 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RN7SKP96-201ENST00000516948 297 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 RNU6-1003P-201ENST00000517099 105 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 AP003181.2-201ENST00000528941 181 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDKL5O76039 GLYCAM1-201ENST00000546596 285 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 PARP1P2-201ENST00000556806 195 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 HSPE1P3-201ENST00000559254 309 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 NRBF2P1-201ENST00000587407 859 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AL391646.1-201ENST00000603860 190 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 AC011816.2-201ENST00000607089 556 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.51□□□□□ -1.69
CDKL5O76039 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 MIR1321-201ENST00000637766 79 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.51□□□□□ -1.69
CDKL5O76039 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDKL5O76039 CCT4P2-201ENST00000233836 1548 ntBASIC4.51□□□□□ -1.69
CDKL5O76039 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.51□□□□□ -1.69
CDKL5O76039 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDKL5O76039 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
CDKL5O76039 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDKL5O76039 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDKL5O76039 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDKL5O76039 AC092326.2-201ENST00000624772 1561 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 Y_RNA.160-201ENST00000363677 92 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 RNU6-483P-201ENST00000384088 108 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 TPMTP2-201ENST00000414372 726 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 HMGB3P20-201ENST00000417997 600 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.5□□□□□ -1.69
CDKL5O76039 RSL24D1P6-201ENST00000426934 401 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 MTND1P14-201ENST00000427400 950 ntBASIC4.5□□□□□ -1.69
CDKL5O76039 RPL22P17-201ENST00000438729 315 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms