Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC012409.4-201ENST00000612923 249 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM13O60858 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM13O60858 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM13O60858 KPNA2P2-201ENST00000419546 1489 ntBASIC4.69□□□□□ -1.66
TRIM13O60858 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM13O60858 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM13O60858 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM13O60858 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM13O60858 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM13O60858 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 MIR323A-201ENST00000362199 86 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 RNU6-552P-201ENST00000362869 119 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 RNU6-853P-201ENST00000364306 107 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 Y_RNA.463-201ENST00000384271 102 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 RNU6-441P-201ENST00000384545 106 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 MIR649-201ENST00000384843 97 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 RNU6-1109P-201ENST00000391187 107 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AL606923.1-201ENST00000406616 190 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 MIR1282-201ENST00000408865 101 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC080125.1-201ENST00000414888 684 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM13O60858 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM13O60858 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC005008.1-201ENST00000456151 612 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AP1S2P1-201ENST00000457344 379 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC026410.2-201ENST00000460281 156 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC104563.1-201ENST00000476147 376 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AK3P4-201ENST00000504283 583 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM13O60858 IGKV2-18-201ENST00000522607 343 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 CYCSP28-201ENST00000534284 321 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AL118558.2-201ENST00000556294 238 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC124068.1-201ENST00000563131 678 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC209154.1-201ENST00000582156 337 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 MIR4691-201ENST00000583764 85 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC105224.1-201ENST00000587055 421 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 BNIP3P16-201ENST00000589779 534 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 BBIP1P1-201ENST00000602999 279 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 AC006157.1-201ENST00000611750 366 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM13O60858 PLCE1P1-201ENST00000622094 305 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM13O60858 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TRIM13O60858 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM13O60858 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 CDC27P3-201ENST00000635418 1910 ntBASIC4.68□□□□□ -1.66
TRIM13O60858 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM13O60858 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM13O60858 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 AC083843.3-201ENST00000623679 2186 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 AL139276.1-201ENST00000311910 1001 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM13O60858 RN7SKP224-201ENST00000364140 325 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TRIM13O60858 RNU6-33P-201ENST00000384793 107 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RNU6-903P-201ENST00000391270 109 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 MTCO2P33-201ENST00000402100 465 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 MIR1286-201ENST00000408112 78 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RNU2-50P-201ENST00000410494 143 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 Z74021.1-201ENST00000423610 407 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 OR4K11P-201ENST00000431829 904 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 AL138899.2-201ENST00000439139 499 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM13O60858 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AL392103.1-201ENST00000447000 198 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RPL10P17-201ENST00000453852 316 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM13O60858 AC092324.1-201ENST00000468671 324 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RPL7L1P8-201ENST00000469911 741 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 AC011005.3-201ENST00000491624 395 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 RPS27P27-201ENST00000498779 255 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 TRBVA-201ENST00000498804 316 ntBASIC4.67□□□□□ -1.66
TRIM13O60858 MRPS33P2-201ENST00000507850 322 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms