Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SMAD9O15198 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 RNA5SP295-201ENST00000362655 121 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 RPS20P2-201ENST00000402520 389 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 CCNG1P1-201ENST00000406783 885 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD9O15198 DUTP6-201ENST00000425573 462 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 MTCO1P39-201ENST00000426148 480 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AL356583.2-201ENST00000426536 280 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.51□□□□□ -1.85
SMAD9O15198 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD9O15198 RABEPKP1-201ENST00000440529 1026 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 TAF9P1-201ENST00000445421 515 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD9O15198 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 TAF9P2-201ENST00000454958 515 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD9O15198 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.51□□□□□ -1.85
SMAD9O15198 MTCO3P28-201ENST00000513351 515 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 FABP5P5-201ENST00000515537 406 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AP000907.2-201ENST00000530827 353 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 SNRPGP16-201ENST00000533275 226 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.51□□□□□ -1.85
SMAD9O15198 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.51□□□□□ -1.85
SMAD9O15198 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 RN7SL703P-201ENST00000578485 302 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AC068790.3-201ENST00000602988 553 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AC006023.2-201ENST00000609916 167 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 MIR486-1-201ENST00000612171 68 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AL139089.1-201ENST00000620372 975 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AL590240.3-201ENST00000621416 943 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 AC112204.3-201ENST00000623822 332 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.51□□□□□ -1.85
SMAD9O15198 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.51□□□□□ -1.85
SMAD9O15198 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMAD9O15198 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD9O15198 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD9O15198 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD9O15198 HSPA8P1-201ENST00000425843 1833 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD9O15198 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SMAD9O15198 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 RNU6-173P-201ENST00000364215 104 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RNU6-637P-201ENST00000384050 107 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RNU6-213P-201ENST00000384051 104 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RN7SKP56-201ENST00000410513 331 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RNU6-516P-201ENST00000411381 104 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC011742.1-201ENST00000431448 434 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 RANP8-201ENST00000444720 713 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AL360221.1-201ENST00000445989 335 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 VN1R34P-201ENST00000447387 883 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 DNAJC19P1-201ENST00000455312 319 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RNA5SP269-201ENST00000459032 137 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RN7SL542P-201ENST00000467147 294 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 RPL7P24-201ENST00000493052 752 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC004069.2-201ENST00000505438 1114 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 MTCO2P32-201ENST00000514865 403 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD9O15198 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 AL133271.1-201ENST00000538229 291 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.5□□□□□ -1.85
SMAD9O15198 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 ZNF519P3-201ENST00000557158 1032 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 AL360157.1-201ENST00000565962 87 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 MIR3158-1-201ENST00000583596 81 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.5□□□□□ -1.85
SMAD9O15198 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD9O15198 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.5□□□□□ -1.85
SMAD9O15198 AL451086.1-201ENST00000605596 223 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC025594.3-201ENST00000613068 790 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC104010.1-201ENST00000616889 150 ntBASIC3.5□□□□□ -1.85
SMAD9O15198 AC009268.2-201ENST00000621925 457 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms