Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-603P-201ENST00000411403 107 ntBASIC2.89□□□□□ -1.95
CHD1O14646 AC107393.1-201ENST00000512403 346 ntBASIC2.89□□□□□ -1.95
CHD1O14646 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.89□□□□□ -1.95
CHD1O14646 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.89□□□□□ -1.95
CHD1O14646 MIR502-201ENST00000606349 86 ntBASIC2.89□□□□□ -1.95
CHD1O14646 AC131902.3-201ENST00000611767 581 ntBASIC2.89□□□□□ -1.95
CHD1O14646 AC022709.1-201ENST00000615967 87 ntBASIC2.89□□□□□ -1.95
CHD1O14646 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.88□□□□□ -1.95
CHD1O14646 AC013404.1-201ENST00000413068 249 ntBASIC2.88□□□□□ -1.95
CHD1O14646 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.88□□□□□ -1.95
CHD1O14646 RNU2-58P-201ENST00000516403 183 ntBASIC2.88□□□□□ -1.95
CHD1O14646 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.88□□□□□ -1.95
CHD1O14646 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CHD1O14646 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHD1O14646 RNU6-1263P-201ENST00000384601 106 ntBASIC2.88□□□□□ -1.95
CHD1O14646 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CHD1O14646 TOMM22P1-201ENST00000418578 312 ntBASIC2.88□□□□□ -1.95
CHD1O14646 HMGB3P10-201ENST00000434734 572 ntBASIC2.88□□□□□ -1.95
CHD1O14646 HMGB3P21-201ENST00000452483 547 ntBASIC2.88□□□□□ -1.95
CHD1O14646 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
CHD1O14646 AC008571.1-201ENST00000467232 300 ntBASIC2.88□□□□□ -1.95
CHD1O14646 MTCO1P30-201ENST00000515244 580 ntBASIC2.88□□□□□ -1.95
CHD1O14646 AC084757.1-201ENST00000559987 490 ntBASIC2.88□□□□□ -1.95
CHD1O14646 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.88□□□□□ -1.95
CHD1O14646 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CHD1O14646 AC110774.1-201ENST00000623567 2018 ntBASIC2.87□□□□□ -1.95
CHD1O14646 AC244517.1-201ENST00000606030 2086 ntBASIC2.87□□□□□ -1.95
CHD1O14646 RNA5SP295-201ENST00000362655 121 ntBASIC2.87□□□□□ -1.95
CHD1O14646 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.87□□□□□ -1.95
CHD1O14646 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
CHD1O14646 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.87□□□□□ -1.95
CHD1O14646 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHD1O14646 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.87□□□□□ -1.95
CHD1O14646 AC006270.2-201ENST00000578523 652 ntBASIC2.87□□□□□ -1.95
CHD1O14646 MTND4P23-201ENST00000447723 1363 ntBASIC2.86□□□□□ -1.95
CHD1O14646 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHD1O14646 UBE2L2-201ENST00000254302 429 ntBASIC2.86□□□□□ -1.95
CHD1O14646 MIR96-201ENST00000362288 78 ntBASIC2.86□□□□□ -1.95
CHD1O14646 RPL5P19-201ENST00000404228 893 ntBASIC2.86□□□□□ -1.95
CHD1O14646 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.86□□□□□ -1.95
CHD1O14646 ARPC3P1-201ENST00000437218 533 ntBASIC2.86□□□□□ -1.95
CHD1O14646 AC007395.1-201ENST00000451333 677 ntBASIC2.86□□□□□ -1.95
CHD1O14646 RNU7-157P-201ENST00000459600 66 ntBASIC2.86□□□□□ -1.95
CHD1O14646 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.86□□□□□ -1.95
CHD1O14646 SNORD39.2-201ENST00000579995 76 ntBASIC2.86□□□□□ -1.95
CHD1O14646 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.86□□□□□ -1.95
CHD1O14646 OR4G1P-203ENST00000641984 1631 ntBASIC2.86□□□□□ -1.95
CHD1O14646 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
CHD1O14646 AC109583.1-201ENST00000432156 268 ntBASIC2.85□□□□□ -1.95
CHD1O14646 RPL23AP7-203ENST00000449021 469 ntBASIC2.85□□□□□ -1.95
CHD1O14646 CLIC4P1-201ENST00000453177 535 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.85□□□□□ -1.95
CHD1O14646 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.85□□□□□ -1.95
CHD1O14646 SNX5P1-201ENST00000505757 1041 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.85□□□□□ -1.95
CHD1O14646 MIR4421-201ENST00000578133 69 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AC009314.1-201ENST00000603871 304 ntBASIC2.85□□□□□ -1.95
CHD1O14646 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
CHD1O14646 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.85□□□□□ -1.95
CHD1O14646 AC079804.2-201ENST00000490376 200 ntBASIC2.85□□□□□ -1.95
CHD1O14646 SNORA31.15-201ENST00000516771 132 ntBASIC2.85□□□□□ -1.95
CHD1O14646 MIR4512-201ENST00000583257 77 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AC090953.1-201ENST00000604305 1092 ntBASIC2.85□□□□□ -1.95
CHD1O14646 AC018754.1-201ENST00000607486 925 ntBASIC2.85□□□□□ -1.95
CHD1O14646 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.85□□□□□ -1.95
CHD1O14646 RNU4-13P-201ENST00000364019 141 ntBASIC2.84□□□□□ -1.96
CHD1O14646 SNORD114-22-201ENST00000365423 72 ntBASIC2.84□□□□□ -1.96
CHD1O14646 HMGN2P35-201ENST00000412164 270 ntBASIC2.84□□□□□ -1.96
CHD1O14646 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.84□□□□□ -1.96
CHD1O14646 RAB9AP5-201ENST00000437794 597 ntBASIC2.84□□□□□ -1.96
CHD1O14646 RAB9AP2-201ENST00000443911 597 ntBASIC2.84□□□□□ -1.96
CHD1O14646 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.84□□□□□ -1.96
CHD1O14646 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.84□□□□□ -1.96
CHD1O14646 AC008015.1-201ENST00000555505 465 ntBASIC2.84□□□□□ -1.96
CHD1O14646 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.84□□□□□ -1.96
CHD1O14646 AL133393.1-201ENST00000603277 287 ntBASIC2.84□□□□□ -1.96
CHD1O14646 AC123786.2-201ENST00000603459 275 ntBASIC2.84□□□□□ -1.96
CHD1O14646 AC024560.3-201ENST00000608482 349 ntBASIC2.84□□□□□ -1.96
CHD1O14646 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHD1O14646 RNU6-356P-201ENST00000384140 107 ntBASIC2.83□□□□□ -1.96
CHD1O14646 RPS7P2-201ENST00000435134 607 ntBASIC2.83□□□□□ -1.96
CHD1O14646 GZMAP1-201ENST00000503054 631 ntBASIC2.83□□□□□ -1.96
CHD1O14646 AC109464.2-201ENST00000510242 943 ntBASIC2.83□□□□□ -1.96
CHD1O14646 TTC39CP1-201ENST00000512513 755 ntBASIC2.83□□□□□ -1.96
CHD1O14646 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.83□□□□□ -1.96
CHD1O14646 AP004242.1-201ENST00000533701 349 ntBASIC2.83□□□□□ -1.96
CHD1O14646 AP000787.2-201ENST00000604432 568 ntBASIC2.83□□□□□ -1.96
CHD1O14646 RPL23AP88-201ENST00000605759 454 ntBASIC2.83□□□□□ -1.96
CHD1O14646 AL135786.2-201ENST00000608422 615 ntBASIC2.83□□□□□ -1.96
CHD1O14646 AC005296.1-201ENST00000616145 209 ntBASIC2.83□□□□□ -1.96
CHD1O14646 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.83□□□□□ -1.96
CHD1O14646 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHD1O14646 RNA5SP160-201ENST00000364866 120 ntBASIC2.82□□□□□ -1.96
CHD1O14646 POLR2J4-204ENST00000418424 324 ntBASIC2.82□□□□□ -1.96
CHD1O14646 AC090453.1-201ENST00000495560 436 ntBASIC2.82□□□□□ -1.96
CHD1O14646 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.82□□□□□ -1.96
CHD1O14646 AC009318.3-201ENST00000616916 503 ntBASIC2.82□□□□□ -1.96
CHD1O14646 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.82□□□□□ -1.96
CHD1O14646 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms