Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC004009.2-201ENST00000623016 728 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AP002791.1-201ENST00000623291 381 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AP000770.2-201ENST00000623694 100 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AC012005.1-201ENST00000624575 75 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 AC007496.3-201ENST00000624987 3443 ntBASIC3.23□□□□□ -1.89
NEDD8-MDP1E9PL57 OR4G11P-202ENST00000642116 1414 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 OR5H2-201ENST00000355273 945 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC119751.3-201ENST00000399720 670 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 MTCYBP38-201ENST00000417160 1123 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC007742.1-201ENST00000425789 329 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 ELOCP26-201ENST00000436067 329 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 MTND4P6-201ENST00000438297 472 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AL831737.1-201ENST00000441288 271 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 NPM1P49-201ENST00000448027 714 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 RNU7-136P-201ENST00000458819 69 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AP001486.1-201ENST00000463339 476 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC097493.1-201ENST00000463958 372 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 RPS3AP14-201ENST00000483907 780 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 HSPE1P23-201ENST00000509838 286 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC010265.1-201ENST00000513509 211 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 RNU1-103P-201ENST00000516502 125 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC011602.1-201ENST00000546484 331 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AL137843.1-201ENST00000605078 385 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 TUSC7.1-201ENST00000610969 165 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC231657.1-201ENST00000624313 397 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC048347.1-201ENST00000624621 427 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 AC118273.1-201ENST00000525324 3006 ntBASIC3.22□□□□□ -1.89
NEDD8-MDP1E9PL57 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.21□□□□□ -1.89
NEDD8-MDP1E9PL57 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.21□□□□□ -1.89
NEDD8-MDP1E9PL57 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NEDD8-MDP1E9PL57 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL157700.1-201ENST00000561973 1432 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-878P-201ENST00000384578 110 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RNU6-837P-201ENST00000391056 108 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL5P18-201ENST00000406671 891 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 USP9YP33-201ENST00000412220 421 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 TPMTP2-201ENST00000414372 726 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL953862.1-201ENST00000423016 168 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL35AP12-201ENST00000425362 338 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 TXNL1P1-201ENST00000429528 554 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL590233.1-201ENST00000430017 456 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 NEK4P1-201ENST00000433383 879 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 USP9YP35-201ENST00000435696 412 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC108734.1-201ENST00000439549 399 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC140076.1-201ENST00000449897 361 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 ANKRD26P4-201ENST00000455755 950 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 snoU109.4-201ENST00000458953 143 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AL049873.1-201ENST00000480540 376 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC080014.1-201ENST00000496877 1201 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC078918.1-201ENST00000498515 228 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 AC147055.4-201ENST00000504399 745 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 RN7SKP272-201ENST00000516988 232 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 PSMA2P1-201ENST00000526365 646 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 EEF1B2P4-201ENST00000551398 348 ntBASIC3.21□□□□□ -1.9
NEDD8-MDP1E9PL57 EIF4BP1-201ENST00000554881 351 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms