Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP000776.1-201ENST00000530032 1663 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 MTND4P33-201ENST00000556706 766 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 OR4K8P-201ENST00000578842 1048 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AL606834.2-201ENST00000602954 668 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC009220.3-201ENST00000604318 586 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC106900.2-201ENST00000604994 317 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AL158042.1-201ENST00000605338 460 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC005000.2-201ENST00000605468 310 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC008962.1-201ENST00000605729 304 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AL390208.1-201ENST00000605885 644 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC007349.4-201ENST00000608114 532 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AP000240.1-201ENST00000609910 452 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC068787.1-201ENST00000623908 691 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AL390862.1-201ENST00000635467 1469 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 AC093010.3-201ENST00000570269 15214 ntBASIC3.06□□□□□ -1.92
NPIPA2E9PIF3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 TAB3P1-202ENST00000452645 1634 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 ZNF876P-202ENST00000398732 1485 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AL356473.1-201ENST00000406203 1408 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RNU6-28P-201ENST00000362378 107 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RNA5SP197-201ENST00000363357 119 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RNU6-621P-201ENST00000364752 109 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 SNORA48.2-201ENST00000390926 124 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RPS3AP26-201ENST00000398259 784 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 U3.42-201ENST00000408746 214 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC126124.2-201ENST00000413542 321 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 Z99755.1-201ENST00000414048 380 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 OR6K5P-201ENST00000447050 945 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC008264.1-201ENST00000447612 367 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 BX322784.1-201ENST00000455793 1077 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RPL7P18-201ENST00000478965 734 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 FAM172BP-201ENST00000487497 1089 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC020893.1-201ENST00000502452 580 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 CBX3P3-201ENST00000508108 532 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC093677.1-201ENST00000514414 678 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RNU6-711P-201ENST00000517255 106 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 CYCSP2-201ENST00000558168 301 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC009712.1-201ENST00000564938 316 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC034268.2-201ENST00000571784 482 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC245297.2-201ENST00000610119 565 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 RMST_8.1-201ENST00000610287 165 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC097478.2-201ENST00000610572 514 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC092106.3-201ENST00000611308 722 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AP000484.1-201ENST00000620067 1252 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.05□□□□□ -1.92
NPIPA2E9PIF3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC005539.1-201ENST00000443768 1479 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 HMGB1P17-201ENST00000403495 628 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 RNU6-757P-201ENST00000410334 100 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 RN7SKP111-201ENST00000410349 271 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 MTCO2P5-201ENST00000422621 426 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 Z80107.1-201ENST00000436830 412 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 SDCBPP1-201ENST00000440192 890 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC140076.1-201ENST00000449897 361 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC006539.3-201ENST00000454258 129 ntBASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.04□□□□□ -1.92
NPIPA2E9PIF3 AC021205.2-201ENST00000480069 347 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms