Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 SAGE4P-201ENST00000442271 3381 ntBASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49D1C9J1S8 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 SNORD113-6-201ENST00000363345 75 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 RNU4-28P-201ENST00000364739 141 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-1300P-201ENST00000391046 108 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MTCO3P1-205ENST00000422088 832 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC092447.3-201ENST00000426027 686 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 DPRXP1-201ENST00000426312 460 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 OR51AB1P-201ENST00000429046 620 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MRPL50P4-201ENST00000446432 475 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 RN7SL807P-201ENST00000470923 297 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MTCYBP16-201ENST00000509187 1129 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 HIGD1AP3-201ENST00000515857 278 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 SNORA70.24-201ENST00000517233 118 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 ELOCP31-201ENST00000540463 467 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MTCO3P13-201ENST00000577757 781 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC025588.2-201ENST00000604851 466 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC069545.1-201ENST00000605671 358 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AL451074.6-201ENST00000608512 729 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC002076.2-201ENST00000617362 122 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 OR1S1-201ENST00000624470 978 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MIR3651-201ENST00000630427 90 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 LRRC77P-213ENST00000637727 880 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AP000776.1-201ENST00000530032 1663 ntBASIC2.82□□□□□ -1.96
TRIM49D1C9J1S8 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 Y_RNA.465-201ENST00000384293 102 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 RNU6-441P-201ENST00000384545 106 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MIR491-201ENST00000384877 84 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AL512633.1-201ENST00000399931 655 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AL031121.1-201ENST00000406553 254 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MRPS36P1-201ENST00000421291 307 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MTND1P32-201ENST00000433043 938 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AL513043.1-201ENST00000439124 535 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC092393.1-201ENST00000439625 742 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 Z77249.1-201ENST00000444622 1175 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 ARPC3P2-201ENST00000457786 533 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 RPS3AP43-201ENST00000479743 781 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC108734.3-201ENST00000481241 1165 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC098862.1-201ENST00000504991 413 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MTND4LP22-201ENST00000508209 276 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 RN7SKP96-201ENST00000516948 297 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 PSMA2P1-201ENST00000526365 646 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC090502.2-201ENST00000549267 280 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 SERPINE4P-201ENST00000554978 281 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC004832.5-201ENST00000608677 401 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AP001521.1-201ENST00000609150 300 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC006111.3-201ENST00000622137 383 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC068620.4-201ENST00000636730 1182 ntBASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.81□□□□□ -1.96
TRIM49D1C9J1S8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms