Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MIR4307-201ENST00000582802 84 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC053481.4-201ENST00000583164 216 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 KLKP1-201ENST00000595979 403 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC068790.3-201ENST00000602988 553 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC121247.2-201ENST00000604776 136 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 RNU1-30P-201ENST00000606575 163 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC091965.4-201ENST00000607691 587 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC004067.1-201ENST00000608733 700 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL392048.1-201ENST00000613946 534 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC019226.1-201ENST00000625666 515 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AC010733.2-201ENST00000589496 5702 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.98□□□□□ -1.93
SRRM4A7MD48 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 AL445523.1-201ENST00000451184 1362 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 MTND4P16-201ENST00000466108 1367 ntBASIC2.98□□□□□ -1.93
SRRM4A7MD48 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SRRM4A7MD48 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SRRM4A7MD48 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 RNU6-553P-201ENST00000364047 96 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 RNU6-283P-201ENST00000364788 107 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC007066.1-201ENST00000392902 381 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 PTMAP5-201ENST00000393073 333 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL031577.2-201ENST00000404133 280 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 FAT1P1-201ENST00000406588 507 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 HMGB3P20-201ENST00000417997 600 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL139247.1-201ENST00000422768 325 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 TMEM167AP1-201ENST00000423409 219 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL591419.1-201ENST00000427423 339 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC017083.1-201ENST00000428093 483 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL445567.1-201ENST00000439121 144 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 RPL26P6-201ENST00000440913 438 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 MTND1P29-201ENST00000448112 647 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 OR6C5P-201ENST00000452388 923 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 CFTRP1-201ENST00000456646 183 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 RNU7-125P-201ENST00000458760 62 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL049714.1-201ENST00000466686 347 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC114967.1-201ENST00000504890 259 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 HMGB3P15-201ENST00000507326 574 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 RNU6-1231P-201ENST00000517185 103 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 OR8R1P-201ENST00000543943 764 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL121766.1-201ENST00000547436 487 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC136624.4-201ENST00000573044 370 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 MTCYBP33-201ENST00000575007 1130 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 MIR4644-201ENST00000579929 84 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC011468.4-201ENST00000603942 409 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 BCRP9-201ENST00000605312 388 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC103710.4-201ENST00000609301 899 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC103710.1-201ENST00000610003 901 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC013476.2-201ENST00000614456 459 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 AC092140.2-201ENST00000618027 521 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SRRM4A7MD48 CCT4P2-201ENST00000233836 1548 ntBASIC2.97□□□□□ -1.93
SRRM4A7MD48 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
SRRM4A7MD48 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.97□□□□□ -1.93
SRRM4A7MD48 MTND5P33-201ENST00000571250 1450 ntBASIC2.96□□□□□ -1.93
SRRM4A7MD48 ZNF807-201ENST00000328088 1707 ntBASIC2.96□□□□□ -1.93
SRRM4A7MD48 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.96□□□□□ -1.93
SRRM4A7MD48 AC092125.1-201ENST00000562568 1995 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SRRM4A7MD48 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SRRM4A7MD48 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.96□□□□□ -1.94
SRRM4A7MD48 RNU6-660P-201ENST00000364566 109 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SRRM4A7MD48 SNORA1.3-201ENST00000384676 136 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SRRM4A7MD48 U8.14-201ENST00000390843 143 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 RNU6-278P-201ENST00000390945 109 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 RPL7P60-201ENST00000397636 735 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 AL590704.1-201ENST00000402856 794 ntBASIC2.96□□□□□ -1.94
SRRM4A7MD48 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms