Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 IGLV3-17-201ENST00000519099 244 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AL645944.1-201ENST00000603857 493 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC000123.2-201ENST00000623124 461 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RLIMP2-201ENST00000427891 1563 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC093716.1-201ENST00000435923 377 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 MTCYBP31-201ENST00000438855 1122 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 SNORA31.13-201ENST00000516624 135 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 RN7SKP40-201ENST00000517211 242 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 PSMA3P-201ENST00000555485 635 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AC007336.1-201ENST00000576365 3828 ntBASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.74□□□□□ -2.13
COL6A6A6NMZ7 AL391987.6-201ENST00000305671 199 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 RNY1-201ENST00000364228 113 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 TMEM248P1-201ENST00000510579 951 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC084757.1-201ENST00000559987 490 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 MYL12BP1-201ENST00000569826 507 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 PSMA6P4-201ENST00000603247 718 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC091488.1-201ENST00000604239 660 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC006378.2-201ENST00000623178 2476 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC004965.1-201ENST00000413033 213 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 MTCYBP7-201ENST00000419540 1134 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AL445669.2-201ENST00000454425 421 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 MTAPP1-201ENST00000489154 819 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 HAUS1P1-201ENST00000505275 832 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AL035411.2-201ENST00000604022 421 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC022387.2-201ENST00000604050 448 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC010678.1-201ENST00000614118 713 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AL353748.2-201ENST00000622148 471 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 AL355596.1-201ENST00000565399 3996 ntBASIC1.73□□□□□ -2.13
COL6A6A6NMZ7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MTND5P35-201ENST00000557537 1720 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 RNA5SP295-201ENST00000362655 121 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 RNU6-1027P-201ENST00000383998 107 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 RNU6-532P-201ENST00000384318 107 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AL512504.1-201ENST00000415494 778 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC007390.1-201ENST00000415722 356 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC005005.2-201ENST00000420779 380 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 CFTRP1-201ENST00000456646 183 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 OR4P1P-201ENST00000530808 1136 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC007536.1-201ENST00000533382 349 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MTND4LP24-201ENST00000572277 291 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MIR3670-2-201ENST00000582974 65 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MIR3670-1-201ENST00000584160 65 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MIR3670-3-201ENST00000584855 65 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC073387.2-201ENST00000604797 784 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AC131902.3-201ENST00000611767 581 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 MIR3670-4-201ENST00000612260 65 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 C2orf27A-204ENST00000623058 969 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AL359740.1-201ENST00000624340 592 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 SNORA50A-202ENST00000629536 136 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 AL355578.1-201ENST00000607405 1328 ntBASIC1.72□□□□□ -2.13
COL6A6A6NMZ7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AL096701.2-201ENST00000416920 238 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 TRIAP1P1-201ENST00000427062 225 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AL513321.1-201ENST00000441175 761 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 RNU6-826P-201ENST00000516827 104 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 RNU6-250P-201ENST00000516958 103 ntBASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.71□□□□□ -2.13
COL6A6A6NMZ7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.71□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms