Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-216P-201ENST00000363282 104 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-413P-201ENST00000384115 107 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 Y_RNA.500-201ENST00000384466 111 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 MIR591-201ENST00000385290 95 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-837P-201ENST00000391056 108 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SNRPEP2-201ENST00000397592 279 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL590084.1-201ENST00000407885 387 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RNA5SP184-201ENST00000411071 108 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 NUP35P1-201ENST00000422734 947 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL513043.1-201ENST00000439124 535 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SLC31A1P1-201ENST00000451221 567 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 DUXAP8-207ENST00000456786 622 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 HMGN2P16-201ENST00000456802 261 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 HMGB1P25-201ENST00000468402 607 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RPS15AP17-201ENST00000470598 390 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC010460.2-201ENST00000509054 677 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 TPT1P8-201ENST00000510120 555 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC034159.1-201ENST00000513885 583 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC104986.1-201ENST00000517978 436 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AP001372.4-201ENST00000524889 472 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SLC2A13P1-201ENST00000531560 322 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC005832.3-201ENST00000537929 631 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SYF2P1-201ENST00000550658 413 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AP001269.3-201ENST00000588718 329 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 XIAPP1-201ENST00000603162 600 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RPP40P2-201ENST00000603596 712 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL035413.2-201ENST00000604801 525 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC016877.3-201ENST00000606778 504 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 DUXAP10-204ENST00000612052 616 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL020991.1-201ENST00000612314 373 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL050303.3-201ENST00000613704 284 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC022960.3-201ENST00000619794 441 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC006111.3-201ENST00000622137 383 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 MTND2P41-201ENST00000637599 773 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 U6.101-201ENST00000637707 76 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AC007256.1-201ENST00000392253 2765 ntBASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMIM28A0A1B0GU29 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNU4-68P-201ENST00000364314 141 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 MIR9-1-201ENST00000385198 89 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-821P-201ENST00000390995 107 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 UBE2V1P2-201ENST00000397758 440 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNA5SP21-201ENST00000410917 96 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AL513175.2-201ENST00000422071 443 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC063976.3-201ENST00000426849 329 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 ARF4P2-201ENST00000430209 526 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 SNORD109B-201ENST00000458961 67 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 SNORD109A-201ENST00000459128 67 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 KLRA1P-201ENST00000503499 986 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 HMGB3P15-201ENST00000507326 574 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC021146.8-201ENST00000507455 733 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-27P-201ENST00000516146 107 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 RNU6-1073P-201ENST00000517182 106 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 AC245036.5-201ENST00000596330 847 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 CYP3A51P-201ENST00000633513 256 ntBASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.98□□□□□ -1.93
SMIM28A0A1B0GU29 MTND4P34-201ENST00000572715 1371 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms