Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 MIR5092-201ENST00000583139 88 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 VN1R88P-201ENST00000596787 292 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 VN1R78P-201ENST00000597393 564 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AP005137.2-201ENST00000609238 400 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 MIR6895-201ENST00000613497 78 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC079395.3-201ENST00000615161 484 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV4A0A0B4J268 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 MIR208A-201ENST00000362287 71 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RNA5SP27-201ENST00000363839 119 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 SNORA68.1-201ENST00000364537 132 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 MIR524-201ENST00000385242 87 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AL023807.1-201ENST00000407932 359 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 ARL2BPP3-201ENST00000421226 480 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RPL7P44-201ENST00000424827 742 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 WASF1P1-201ENST00000447560 1131 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC104164.3-201ENST00000467363 1258 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RPL31P60-201ENST00000478450 367 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC090096.1-201ENST00000489168 390 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC023424.2-201ENST00000493479 777 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RPL30P5-201ENST00000494923 336 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 EIF4EP3-201ENST00000498782 656 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC121758.2-201ENST00000553271 193 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC005498.1-201ENST00000592125 465 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AP000254.1-201ENST00000609934 520 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 AC009812.4-201ENST00000569134 1805 ntBASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV4A0A0B4J268 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 GNG5P1-201ENST00000255500 204 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RNU1-112P-201ENST00000364401 164 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RNU1-52P-201ENST00000384190 164 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 MIR491-201ENST00000384877 84 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 U3.20-201ENST00000390909 217 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 SNORA11-201ENST00000408789 128 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 MTCO3P30-201ENST00000426425 670 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC090774.1-201ENST00000435925 246 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC105272.1-201ENST00000438604 198 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RPS12P2-201ENST00000439728 269 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC011816.1-201ENST00000441346 546 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL139109.1-201ENST00000455491 297 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RNU7-26P-201ENST00000458980 63 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 MTND4LP3-201ENST00000468320 276 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC080014.1-201ENST00000496877 1201 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC006390.1-201ENST00000508068 283 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL359273.1-201ENST00000510918 627 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 RNU6-27P-201ENST00000516146 107 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC109329.2-201ENST00000519658 482 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 CYCSP39-201ENST00000565821 309 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 ELOCP29-201ENST00000588193 334 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AL451007.1-201ENST00000595491 289 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC002487.1-201ENST00000604565 994 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 FRG1HP-204ENST00000617940 757 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 AC009318.4-201ENST00000620496 486 ntBASIC1.87□□□□□ -2.11
TRAV4A0A0B4J268 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms